DRSC/TRiP Functional Genomics Resources

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Protein Alignment kug and pcdh1g32

DIOPT Version :10

Sequence 1:NP_001027138.2 Gene:kug / 40191 FlyBaseID:FBgn0261574 Length:4699 Species:Drosophila melanogaster
Sequence 2:NP_001019299.3 Gene:pcdh1g32 / 554016 ZFINID:ZDB-GENE-050609-25 Length:945 Species:Danio rerio


Alignment Length:856 Identity:233/856 - (27%)
Similarity:374/856 - (43%) Gaps:135/856 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   767 VHRPEFVNFPQEL--SINESVQLGETVAWIEAKDRDLGYNGKLVF-----AISDGDYDSVFRIDP 824
            :|...|.....||  |..|..:.|..|..:   .:|||.:..::.     .||:.: |..|.:|.
Zfish    20 LHALCFATHASELLYSTAEESKPGTIVGHL---TKDLGMDIHMIVLRQMRIISESN-DKYFNVDL 80

  Fly   825 DRGELQIIGYLDRE-----RQNEYVLNITVYDLGNPTKSTSKMLPITILDVNDNRPVIQKTLATF 884
            ..|.|.|...:|||     |.:.:: .|.: .|.||.:..|  :.|.|:|||||.|..|....:.
Zfish    81 TSGALVIKETMDREILCGGRLHCHI-RIQI-SLQNPLEMHS--VSIEIVDVNDNAPQFQSQNTSL 141

  Fly   885 RLTESARIGTVVHCLHATDADSGINAQVTYALSV-ECSDFTVNATTG-----CLRLNKPLDREKQ 943
            .::|:|..||......|.|.|.|:|:...|.||. :|....::..:.     .|.|||||||||.
Zfish   142 EVSEAAAPGTSFRLESAHDPDVGVNSLRAYYLSQNDCFILKIDTKSDGSKIPILVLNKPLDREKM 206

  Fly   944 DNYALHITAKDGGSPVLSSEALVYVLVDDVNDNAPVFGVQEYIFKVREDLPRGTVLAVIEAVDED 1008
            ..|.|.:||.||||...|..:.|::.:.|||||||.|........:.|:.|.||::.::.|.|.|
Zfish   207 SEYRLILTAVDGGSAEKSGNSAVFINILDVNDNAPHFLNPTKRVTLLENSPHGTLVTLLNASDAD 271

  Fly  1009 IGPNAEIQFSLKEETQDE--ELFRIDKHTGAIRTQGYLDYENKQVHNLIVSAIDGGDPSLTSDMS 1071
            .|.|.||.::..:.|.|.  :||.:|..||.||..|.:|:|..:||::.|.|.|.|.|.:....:
Zfish   272 HGQNGEISYTFDKYTPDSVLKLFSVDSVTGEIRVTGLIDHELAKVHDVTVLARDKGMPPMEGSCN 336

  Fly  1072 IVIMIIDVNENRFAPEFDDFVYEGKVKENKPKGTFVMNVTARDMDT---VDLNSKITYSITGGDG 1133
            |.|.|||||:|  .||....:....:.|:...||.:..:..:|.||   .::|..|.|.:.    
Zfish   337 IKIEIIDVNDN--TPEISINMVSSVISEDVTLGTVIALIKVKDEDTGKNGEVNLHIPYGLP---- 395

  Fly  1134 LGIFAVND--QGSITSLSQ--LDAETKNFYWLTLCAQDCAIVPLSNCVEVYIQVENENDNIPLTD 1194
               |.::.  :|..|.::.  ||.|....|.:|:.|.|....|.|:.....:.:.:.|||.|:..
Zfish   396 ---FKISSPYKGLFTLMADGLLDREAVAEYTITVTATDSGSPPRSSQKSFVLCLSDVNDNPPIFS 457

  Fly  1195 KPVYYVNVTEASVENVEIITLKAFDPDIDPTQTITYNIVSGNLVG-----YFEIDSKTGVIKTTE 1254
            :|.|.|::.|.:..|..::::.|.|||:....||:::|:....:|     |..|:..:|.|... 
Zfish   458 QPSYSVDIAENNAPNAPLLSVSASDPDVGENSTISFSILESEALGLSVSSYVYINPNSGQIYAI- 521

  Fly  1255 RKLDRENQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVYKVQ---------VPS 1310
            ||.|.|:.......|.:.|.|:|..||.:.:.|.:.|.||:.|..   :|...         :|.
Zfish   522 RKFDYEHLNAFQFVVQVQDRGTPSQSSNATVHVFIKDQNDHPPIL---IYPAPTSDGTLHFFIPR 583

  Fly  1311 SATVNQSIFQVHAIDSDSGENGRITYSIKSGKGKNKFRIDSQRGHIHIAKPL---DSDNEFEIHI 1372
            :|::...:.::..:|.|||.|..:.||| .|.....|.||:..|.:..|:.|   ||.:.|.:::
Zfish   584 TASIGHLVNRITFVDGDSGHNAWLFYSI-LGPDAEMFHIDAHTGELRTAQKLSEEDSKSVFSLNV 647

  Fly  1373 KAEDNGIPKKSQTARVNIVVVPVN--------------PNSQNAPLIVRKTSENVVDLTENDKPG 1423
            ..:|||.|.:|.:..|||.:...:              |...|..|.:..|...::..:      
Zfish   648 IVKDNGRPSRSASVAVNITLAEKSSDVSSERRSLTSKTPTGSNLTLYLIITLSFIIAFS------ 706

  Fly  1424 FLVTQILAVDDDNDQLWYNISNGNDDNTFYIGQDNGNILLSKYLDYE----TQQSYNLTISV-TD 1483
            ||....:||.                   ::......|.|.:.|.::    ..|..:|.:.: ||
Zfish   707 FLAIIAIAVR-------------------WLSHHGYMICLMQKLGFKHTPRAHQHNDLHLQLNTD 752

  Fly  1484 GTFTAFTNLLVQVIDINDNPPQFAKDVYHVNISE----------NIEEESVIMQLHATDRDEDKK 1538
            |.        ::.:::......|.|..|...:|.          ...|.::.|:|       .|:
Zfish   753 GP--------IRFMEVVGATQDFHKHAYTPGLSTISSRSDFVFVKAPESTLSMRL-------SKR 802

  Fly  1539 LFYHLHATQDP 1549
            ||.|....|.|
Zfish   803 LFAHSLMKQKP 813

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kugNP_001027138.2 Cadherin_repeat 66..178 CDD:206637
Cadherin_repeat 187..285 CDD:206637
Cadherin_repeat 404..503 CDD:206637
Cadherin_repeat 513..609 CDD:206637
Cadherin_repeat 622..708 CDD:206637
Cadherin_repeat 776..873 CDD:206637 31/108 (29%)
Cadherin_repeat 883..976 CDD:206637 36/98 (37%)
Cadherin_repeat 984..1082 CDD:206637 37/99 (37%)
Cadherin_repeat 1092..1189 CDD:206637 22/103 (21%)
Cadherin_repeat 1197..1295 CDD:206637 29/102 (28%)
Cadherin_repeat 1303..1386 CDD:206637 26/94 (28%)
Cadherin_repeat 1413..1502 CDD:206637 12/93 (13%)
Cadherin_repeat 1510..1608 CDD:206637 11/50 (22%)
Cadherin_repeat 1621..1713 CDD:206637
Cadherin_repeat 1724..1811 CDD:206637
Cadherin_repeat 1819..1927 CDD:206637
Cadherin_repeat 1948..2030 CDD:206637
Cadherin_repeat 2037..2136 CDD:206637
Cadherin_repeat 2144..2235 CDD:206637
Cadherin_repeat 2246..2336 CDD:206637
Cadherin_repeat 2345..2445 CDD:206637
Cadherin_repeat 2453..2545 CDD:206637
Cadherin_repeat 2555..>2633 CDD:206637
Cadherin_repeat 2658..2759 CDD:206637
Cadherin_repeat 2774..2856 CDD:206637
Cadherin_repeat 2865..2963 CDD:206637
Cadherin_repeat 2974..3063 CDD:206637
Cadherin_repeat 3072..3165 CDD:206637
Cadherin_repeat 3173..3269 CDD:206637
Cadherin_repeat 3277..3374 CDD:206637
Cadherin_repeat 3383..3479 CDD:206637
Cadherin_repeat 3488..3579 CDD:206637
Cadherin_repeat 3590..3681 CDD:206637
EGF_CA 3866..3903 CDD:238011
Laminin_G_2 3953..4077 CDD:460494
EGF_CA <4121..4150 CDD:238011
EGF_CA 4152..4189 CDD:238011
EGF_CA 4195..4225 CDD:238011
EGF_CA 4227..4262 CDD:214542
pcdh1g32NP_001019299.3 None
Blue background indicates that the domain is not in the aligned region.

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