DRSC/TRiP Functional Genomics Resources

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Protein Alignment kug and pcdh2aa15

DIOPT Version :10

Sequence 1:NP_001027138.2 Gene:kug / 40191 FlyBaseID:FBgn0261574 Length:4699 Species:Drosophila melanogaster
Sequence 2:NP_001009586.3 Gene:pcdh2aa15 / 493601 ZFINID:ZDB-GENE-041118-15 Length:939 Species:Danio rerio


Alignment Length:921 Identity:234/921 - (25%)
Similarity:357/921 - (38%) Gaps:269/921 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   780 SINESVQLGETVAWIEAKDRDLGYNGKLV----FAISDGDYDSVFRIDPDRGELQIIGYLDR--- 837
            ||:|..:.|..|..:.   :|||.:.|.:    |.|.....:|:|.::.:.|.|.:.|.|||   
Zfish    36 SISEEQKDGTAVGNVA---KDLGIDPKTLKERGFRIVSTSGESMFSVNQNDGVLYVKGKLDRENV 97

  Fly   838 -ERQNEYVLNITVYDLGNPTKSTSKMLPITILDVNDNRPVIQKTLATFRLTESARIGTVVHCLHA 901
             ||....::|:.: .|.||.:  ...:.:.::||||:.|:..:......::|:...|.......|
Zfish    98 CERSTPCLINLKI-ALENPLE--IHYVTVDVIDVNDHAPMFPEQEKRLEISETVLPGARFQLQAA 159

  Fly   902 TDADSGINAQVTYALS------VECSDFTVNATTGCLRLNKPLDREKQDNYALHITAKDGGSPVL 960
            .|.|||.|:..||.||      :|..|...:.....|.|.||||||...:..|.:||.|||.|..
Zfish   160 RDPDSGSNSVQTYKLSHTEYFRIEIKDRYEDGKVPVLILQKPLDREVTKSIKLQLTALDGGRPPK 224

  Fly   961 SSEALVYVLVDDVNDNAPVFGVQEYIFKVREDLPRGTVLAVIEAVDEDIGPNAEIQFSLKEETQD 1025
            |.:..:.:.|.|:|||||||..:.|...:.|:.|.||.:..:.|.|.|.|.|..:.:||..:..|
Zfish   225 SGKMTIIIDVLDINDNAPVFIKEVYSVTLNENTPVGTTILRVNATDLDEGQNGVVVYSLGHDVND 289

  Fly  1026 E--ELFRIDKHTGAIRTQGYLDYENKQVHNLIVSAIDGGDPSLTSDMSIVIMIIDVNENRFAPEF 1088
            :  :||.::..||.|...|.||:|.|.::.:.:.|.|.|...||:|.|:.|.|.|||:|.  |:.
Zfish   290 KLRKLFNVNPVTGEIVVTGLLDFEVKDIYEIDIQASDKGIAPLTTDKSVTIKIADVNDNE--PQI 352

  Fly  1089 DDFVYEGKVKENKPKGTFVMNVTARDMDTVDLNSKITYSITGGDGLGIFAVNDQGSITSLSQLDA 1153
            :.......:.|:...||.|..::..|:|: .:|.::|.|:                         
Zfish   353 EVTSLSSTIPEDSKPGTTVALISVSDLDS-GINGRVTCSL------------------------- 391

  Fly  1154 ETKNFYWLTLCAQDCAIVPLSNCVEVYIQVENENDNIPLTDKPVYYVNVTEASVENVEIITLKAF 1218
                                             ::|||....|        :|.||         
Zfish   392 ---------------------------------SENIPFQLMP--------SSQEN--------- 406

  Fly  1219 DPDIDPTQTITYNIVSGNLVGYFEIDSKTGVIKTTERKLDRENQAEHILEVAISDNGSPVLSSTS 1283
                      ||::|                   |...||||..|.:.:.:...|.|.|.|||..
Zfish   407 ----------TYSLV-------------------TTSALDRETIAHYDITLEAKDAGQPPLSSVK 442

  Fly  1284 RIVVSVLDINDNSPEFDQRVYKVQVPSSATVNQSIFQVHAIDSDSGENGRITYSI-KSGKGKNKF 1347
            .:.|.:.|:|||||||....|...|..:....:|:|.|.|.|.|:|||..::|.| :.|..:|||
Zfish   443 SVTVQISDVNDNSPEFSSSPYAFYVMENNAPGKSLFSVSASDKDTGENSAVSYQIWRDGGAENKF 507

  Fly  1348 ----RIDSQRGHIHIAKPLD--SDNEFEIHIKAEDNGIPKKSQTARVNIVVVPVNPNSQNAPLIV 1406
                .|:|:.|.|:..|..|  :...|:.||.|.|:|.|..|....||:.::..|   .|.|:|:
Zfish   508 TSFININSENGEIYALKSFDFETSKTFQFHILATDSGSPSLSSNVTVNVFILDQN---DNVPVIL 569

  Fly  1407 RKTS-----ENVVDLTENDKPGFLVTQILAVDDDNDQLWYNISNGNDDNTFYIGQDNGNILLSKY 1466
            ...|     |.|.::..|...|.|||::.|.|.|                  ||. ||.:|.|  
Zfish   570 YPVSANGSAEGVEEIPRNVNAGHLVTKVRAYDAD------------------IGY-NGWLLFS-- 613

  Fly  1467 LDYETQQSYNLTISVTDGTFTAFTNLLVQVIDINDNPPQFAKDVYHVNISENIEEESVIMQLHAT 1531
                                                                             
Zfish   614 ----------------------------------------------------------------- 613

  Fly  1532 DRDEDKKLFYHLHATQDPSSLALFRIDSISGNVIVTQRLDFEKTAQHILIVFVKDQGAPGKRNYA 1596
                          .|:.|..:||.:|..:|.:...:.......|||.|::.|||.|.......|
Zfish   614 --------------LQEVSEHSLFALDRYTGQIRTLRSFTETDEAQHKLVILVKDNGNVSLSATA 664

  Fly  1597 KIIVNVHDHNDHHPEFTAKIIQSKVPESAAIGSKLAEVRAIDRDSGHNAEIQYSIIT-GNVGSVF 1660
            .:||              |:::.|...:|      ::|:..::|...|....|.||| |:|..:|
Zfish   665 TVIV--------------KVVEPKEAFAA------SDVKNAEKDEEENNVTFYLIITLGSVSVLF 709

  Fly  1661 EIDPTFGIITL 1671
            .|    .||.|
Zfish   710 VI----SIIVL 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kugNP_001027138.2 Cadherin_repeat 66..178 CDD:206637
Cadherin_repeat 187..285 CDD:206637
Cadherin_repeat 404..503 CDD:206637
Cadherin_repeat 513..609 CDD:206637
Cadherin_repeat 622..708 CDD:206637
Cadherin_repeat 776..873 CDD:206637 28/100 (28%)
Cadherin_repeat 883..976 CDD:206637 33/98 (34%)
Cadherin_repeat 984..1082 CDD:206637 35/99 (35%)
Cadherin_repeat 1092..1189 CDD:206637 9/96 (9%)
Cadherin_repeat 1197..1295 CDD:206637 21/97 (22%)
Cadherin_repeat 1303..1386 CDD:206637 31/89 (35%)
Cadherin_repeat 1413..1502 CDD:206637 15/88 (17%)
Cadherin_repeat 1510..1608 CDD:206637 17/97 (18%)
Cadherin_repeat 1621..1713 CDD:206637 15/52 (29%)
Cadherin_repeat 1724..1811 CDD:206637
Cadherin_repeat 1819..1927 CDD:206637
Cadherin_repeat 1948..2030 CDD:206637
Cadherin_repeat 2037..2136 CDD:206637
Cadherin_repeat 2144..2235 CDD:206637
Cadherin_repeat 2246..2336 CDD:206637
Cadherin_repeat 2345..2445 CDD:206637
Cadherin_repeat 2453..2545 CDD:206637
Cadherin_repeat 2555..>2633 CDD:206637
Cadherin_repeat 2658..2759 CDD:206637
Cadherin_repeat 2774..2856 CDD:206637
Cadherin_repeat 2865..2963 CDD:206637
Cadherin_repeat 2974..3063 CDD:206637
Cadherin_repeat 3072..3165 CDD:206637
Cadherin_repeat 3173..3269 CDD:206637
Cadherin_repeat 3277..3374 CDD:206637
Cadherin_repeat 3383..3479 CDD:206637
Cadherin_repeat 3488..3579 CDD:206637
Cadherin_repeat 3590..3681 CDD:206637
EGF_CA 3866..3903 CDD:238011
Laminin_G_2 3953..4077 CDD:460494
EGF_CA <4121..4150 CDD:238011
EGF_CA 4152..4189 CDD:238011
EGF_CA 4195..4225 CDD:238011
EGF_CA 4227..4262 CDD:214542
pcdh2aa15NP_001009586.3 None
Blue background indicates that the domain is not in the aligned region.

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