DRSC/TRiP Functional Genomics Resources

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Protein Alignment kug and pcdh2ab10

DIOPT Version :10

Sequence 1:NP_001027138.2 Gene:kug / 40191 FlyBaseID:FBgn0261574 Length:4699 Species:Drosophila melanogaster
Sequence 2:NP_001009589.3 Gene:pcdh2ab10 / 493598 ZFINID:ZDB-GENE-041118-9 Length:940 Species:Danio rerio


Alignment Length:714 Identity:222/714 - (31%)
Similarity:315/714 - (44%) Gaps:103/714 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   772 FVNFPQELSINESVQLGETVAWIEAKD-----RDLGYNGKLVFAISDGDYDSVFRIDPDRGELQI 831
            |.|.....||:|....|..|..: |||     :|:...|..:.:.|:..|   |..:...|.|.:
Zfish    24 FTNGQIVYSISEETNPGTAVGNL-AKDFNLNVQDIERRGFQIVSESNKRY---FDFNFKTGVLHV 84

  Fly   832 IGYLDRER----------QNEYVLN--ITVYDLGNPTKSTSKMLPITILDVNDNRPVIQKTLATF 884
            ...:|||.          ..|.::|  :.||           ...|.:||:|||.|..:....|.
Zfish    85 KERIDREELCEQKIKCSLPLEAIVNSPLNVY-----------RFEINVLDINDNPPKFRTPKTTI 138

  Fly   885 RLTESARIGTVVHCLHATDADSGINAQVTYALSVECSDFTVNATTGC-------LRLNKPLDREK 942
            .::|.|..|.......|.|||.|||:..:|.||.. ..|:::..:|.       |.|.|.|||||
Zfish   139 NISELALPGEQFALPSAFDADVGINSVKSYKLSPN-EHFSLDVQSGGEQSVSAELVLQKALDREK 202

  Fly   943 QDNYALHITAKDGGSPVLSSEALVYVLVDDVNDNAPVFGVQEYIFKVREDLPRGTVLAVIEAVDE 1007
            |....|.:||.|||.|:.|....:.|.|:|||||.|||....|..:|.|:.|.||.:..::|.|.
Zfish   203 QPLIRLTLTAVDGGKPLRSGTMQITVNVEDVNDNIPVFSKSLYKARVNENAPPGTPIITVQASDP 267

  Fly  1008 DIGPNAEIQFSLKEETQDE--ELFRIDKHTGAIRTQGYLDYENKQVHNLIVSAIDGGDPSLTSDM 1070
            |.|.|.:|.::|.....|.  |.|.|:..||.|..:|.:|||.|....|.|.|.|.|.....:..
Zfish   268 DEGVNGQIVYALVNHDNDRNVESFAINPETGEITVKGDVDYERKNAVELRVQAKDKGHKPRAALC 332

  Fly  1071 SIVIMIIDVNENRFAPEFDDFVYEGKVKENKPKGTFVMNVTARDMDTVDLNSKITYSITGGDGLG 1135
            .:::.|||:|:|  .||.........|||:....|.|..:|..|.| ...|.::..:|.|.....
Zfish   333 KVLLEIIDINDN--VPEISVTSLVNTVKEDALIDTVVGMITVTDND-AGKNGQVILNIQGSSPFK 394

  Fly  1136 IFAVNDQGSITSL---SQLDAETKNFYWLTLCAQDCAIVPLSNCVEVYIQVENENDNIPLTDKPV 1197
            :  .|...:..:|   ..||.|..:.|.:|:.|.|....|||:...:.:.|.:.|||.|...:||
Zfish   395 V--QNSYKNYYTLFVNGPLDRERASEYNVTISAADEGTPPLSSTSVIAVHVSDVNDNAPRFPEPV 457

  Fly  1198 YYVNVTEASVENVEIITLKAFDPDIDPTQTITYNIV----SGNLVGYFEIDSKTG---------- 1248
            ..|.|.|.|.....:.|:.|.|||:.....|||:::    ||.:.....|:|.||          
Zfish   458 INVYVKENSQIGAVLHTVSAVDPDVGDNARITYSLLESSKSGPVTSMININSDTGDLHSLQSFNY 522

  Fly  1249 -VIKTTERKLDRENQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSP----EFDQ--RVYKV 1306
             .|||.|.|            |..:|:|.|.|||...:.|.|||.|||||    .:.:  .|...
Zfish   523 EEIKTFEFK------------VQATDSGVPPLSSNVTVNVFVLDENDNSPAILAPYSELGSVNTE 575

  Fly  1307 QVPSSATVNQSIFQVHAIDSDSGENGRITYSIKSGKGKNKFRIDSQRGHIHIAKPLDSDNEFEIH 1371
            .:|.||.....:.::.|:|:|||.|..::|.|...||.|.|||.:..|.|...:.: |||:.:.|
Zfish   576 NIPYSAEAGYFVAKIRAVDADSGYNALLSYHISEPKGNNLFRIGTSSGEIRTKRRM-SDNDLKTH 639

  Fly  1372 ---IKAEDNGIPKKSQTARVNIVVV-------------PVNPNS---QNAPLIVRKTSENVVDL 1416
               |...|||.|..|.|..::.|||             ||...|   .|..|::...|.:|:.|
Zfish   640 PLVILVCDNGEPSLSATVSIDAVVVESGGDVKTPFRHAPVKEESFSDLNLYLLIAIVSVSVIFL 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kugNP_001027138.2 Cadherin_repeat 66..178 CDD:206637
Cadherin_repeat 187..285 CDD:206637
Cadherin_repeat 404..503 CDD:206637
Cadherin_repeat 513..609 CDD:206637
Cadherin_repeat 622..708 CDD:206637
Cadherin_repeat 776..873 CDD:206637 26/113 (23%)
Cadherin_repeat 883..976 CDD:206637 38/99 (38%)
Cadherin_repeat 984..1082 CDD:206637 34/99 (34%)
Cadherin_repeat 1092..1189 CDD:206637 25/99 (25%)
Cadherin_repeat 1197..1295 CDD:206637 36/112 (32%)
Cadherin_repeat 1303..1386 CDD:206637 30/85 (35%)
Cadherin_repeat 1413..1502 CDD:206637 2/4 (50%)
Cadherin_repeat 1510..1608 CDD:206637
Cadherin_repeat 1621..1713 CDD:206637
Cadherin_repeat 1724..1811 CDD:206637
Cadherin_repeat 1819..1927 CDD:206637
Cadherin_repeat 1948..2030 CDD:206637
Cadherin_repeat 2037..2136 CDD:206637
Cadherin_repeat 2144..2235 CDD:206637
Cadherin_repeat 2246..2336 CDD:206637
Cadherin_repeat 2345..2445 CDD:206637
Cadherin_repeat 2453..2545 CDD:206637
Cadherin_repeat 2555..>2633 CDD:206637
Cadherin_repeat 2658..2759 CDD:206637
Cadherin_repeat 2774..2856 CDD:206637
Cadherin_repeat 2865..2963 CDD:206637
Cadherin_repeat 2974..3063 CDD:206637
Cadherin_repeat 3072..3165 CDD:206637
Cadherin_repeat 3173..3269 CDD:206637
Cadherin_repeat 3277..3374 CDD:206637
Cadherin_repeat 3383..3479 CDD:206637
Cadherin_repeat 3488..3579 CDD:206637
Cadherin_repeat 3590..3681 CDD:206637
EGF_CA 3866..3903 CDD:238011
Laminin_G_2 3953..4077 CDD:460494
EGF_CA <4121..4150 CDD:238011
EGF_CA 4152..4189 CDD:238011
EGF_CA 4195..4225 CDD:238011
EGF_CA 4227..4262 CDD:214542
pcdh2ab10NP_001009589.3 None
Blue background indicates that the domain is not in the aligned region.

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