DRSC/TRiP Functional Genomics Resources

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Protein Alignment kug and pcdh2ab2

DIOPT Version :10

Sequence 1:NP_001027138.2 Gene:kug / 40191 FlyBaseID:FBgn0261574 Length:4699 Species:Drosophila melanogaster
Sequence 2:NP_001009592.3 Gene:pcdh2ab2 / 493588 ZFINID:ZDB-GENE-041118-2 Length:944 Species:Danio rerio


Alignment Length:851 Identity:239/851 - (28%)
Similarity:351/851 - (41%) Gaps:161/851 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   780 SINESVQLGETVAWIEAKD-----RDLGYNGKLVFAISDGDYDSVFRIDPDRGELQIIGYLDRE- 838
            |::|.|..|.||..: |||     :||...|   |.|..|.....|.:....|.|.:...:||| 
Zfish    36 SVSEEVNTGTTVGNL-AKDLNLNVQDLERRG---FQIVSGPNKQYFDLHARNGILFVRERIDREE 96

  Fly   839 ---RQNEYVLNI--------TVYDLGNPTKSTSKMLPITILDVNDNRPVIQKTLATFRLTESARI 892
               |.::..|.:        ::|           ...:.|||||||.|..:.:.....::|....
Zfish    97 LCGRSSKCALELEAIVSAPMSIY-----------RFEVNILDVNDNAPTFRTSKLFLNISEQTYP 150

  Fly   893 GTVVHCLHATDADSGINAQVTYALSV---------ECSDFTVNATTGCLRLNKPLDREKQDNYAL 948
            |.......|.|.|:|:|:..:|.||.         ...|.:|:|.   |.|.|.||||||....|
Zfish   151 GQRFTLPSAFDLDAGVNSVKSYKLSANEHFSLDVQSAGDQSVSAE---LVLQKALDREKQPVIRL 212

  Fly   949 HITAKDGGSPVLSSEALVYVLVDDVNDNAPVFGVQEYIFKVREDLPRGTVLAVIEAVDEDIGPNA 1013
            .:||.|||.|.:|....:.|.|.|||||.|||....|..::.|:...|..:..:.|.|.|.|.|.
Zfish   213 TLTAVDGGKPPMSGTTQIIVNVVDVNDNIPVFDKPLYKARIAENSAIGASVITVSAKDADEGLNG 277

  Fly  1014 EIQFSLKEETQDEEL--FRIDKHTGAIRTQGYLDYENKQVHNLIVSAIDGGDPSLTSDMSIVIMI 1076
            |:.:|......:..:  |.|:.:||.|..:|.||||......:.|.|.|.|.....|...::..|
Zfish   278 EVIYSFINHDNENSINAFLINPNTGEITVKGPLDYEENAAIEIRVQAEDKGQNPRASHCKVLFEI 342

  Fly  1077 IDVNENRFAPEFDDFVYEGKVKENKPKGTFVMNVTARDMDTVDLNSKITYSITGGDGLGIFAVND 1141
            ||:|:|  .||........:|||:...||.|..:|.:|.|            .|.:|:....:.|
Zfish   343 IDLNDN--TPEISIMSLVNEVKEDSAPGTMVGLITVKDGD------------AGKNGVVRLQIRD 393

  Fly  1142 QG------------SITSLSQLDAETKNFYWLTLCAQDCAIVPLSNCVEVYIQVENENDNIPLTD 1194
            ..            |:.....||.|..:.|.:|:.|.|....|||:...:.:.|.:.|||.|...
Zfish   394 SAQFRLENTYKNRFSLVVNGPLDREVASEYNVTISAADEGSPPLSSTSVIAVHVSDVNDNAPRFP 458

  Fly  1195 KPVYYVNVTEASVENVEIITLKAFDPDIDPTQTITYNIV----SGNLVGYFEIDSKTG------- 1248
            :||..|.|.|.|.....:.|:.|.|||:.....|||:::    ||.:.....|:|.||       
Zfish   459 EPVINVYVKENSQIGAVLHTVSAVDPDVGDNAKITYSLLESSKSGPVTSMININSDTGDLHSLQS 523

  Fly  1249 ----VIKTTERKLDRENQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSP----EFDQ--RV 1303
                .|||.|.|            |..:|:|.|.|||...:.|.|||.|||||    .:.:  .|
Zfish   524 FNYEEIKTFEFK------------VQATDSGVPPLSSNVTVNVFVLDENDNSPAILAPYSELGSV 576

  Fly  1304 YKVQVPSSATVNQSIFQVHAIDSDSGENGRITYSIKSGKGKNKFRIDSQRGHIHIAKPLDSDNEF 1368
            ....:|.||.....:.::.|:|:|||.|..::|.|...||.|.|||.:..|.|...:.: |||:.
Zfish   577 NTENIPYSAEAGYFVAKIRAVDADSGYNALLSYHISEPKGNNLFRIGTSSGEIRTKRRM-SDNDL 640

  Fly  1369 EIH---IKAEDNGIPKKSQTARVNIVVV-------------PVNPNS---QNAPLIVRKTSENVV 1414
            :.|   |...|||.|..|.|..::.|||             ||...|   .|..|::...|.:|:
Zfish   641 KTHPLVILVCDNGEPSLSATVSIDAVVVESGGDVKTPFRHAPVKEESFSDLNLYLLIAIVSVSVI 705

  Fly  1415 DL-------------TENDKPGFLVTQILAVDDDNDQLW-YNISNGNDDNTFYIGQDNGNILL-- 1463
            .|             |::....:....|....|.:   | |:.|....|..|.......::::  
Zfish   706 FLLSLISLIAVKCHRTDSSLGRYSAPMITTHPDGS---WSYSKSTQQYDVCFSSDTLKSDVVVFP 767

  Fly  1464 SKYLDYETQQSYNLTISVTDG-TFTAFTNLLVQVIDINDNPPQFAKD-VYHVNISENIE-----E 1521
            :.|...:.:     .||:..| |||.     .|.:...:.|...:.| .|..::...::     |
Zfish   768 APYPPADAE-----LISINGGDTFTR-----TQTLPNKEKPKVPSSDWRYSASLRAGMQSSVRME 822

  Fly  1522 ESVIMQ 1527
            ||.:||
Zfish   823 ESSVMQ 828

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kugNP_001027138.2 Cadherin_repeat 66..178 CDD:206637
Cadherin_repeat 187..285 CDD:206637
Cadherin_repeat 404..503 CDD:206637
Cadherin_repeat 513..609 CDD:206637
Cadherin_repeat 622..708 CDD:206637
Cadherin_repeat 776..873 CDD:206637 29/109 (27%)
Cadherin_repeat 883..976 CDD:206637 35/101 (35%)
Cadherin_repeat 984..1082 CDD:206637 29/99 (29%)
Cadherin_repeat 1092..1189 CDD:206637 25/108 (23%)
Cadherin_repeat 1197..1295 CDD:206637 36/112 (32%)
Cadherin_repeat 1303..1386 CDD:206637 30/85 (35%)
Cadherin_repeat 1413..1502 CDD:206637 18/105 (17%)
Cadherin_repeat 1510..1608 CDD:206637 6/23 (26%)
Cadherin_repeat 1621..1713 CDD:206637
Cadherin_repeat 1724..1811 CDD:206637
Cadherin_repeat 1819..1927 CDD:206637
Cadherin_repeat 1948..2030 CDD:206637
Cadherin_repeat 2037..2136 CDD:206637
Cadherin_repeat 2144..2235 CDD:206637
Cadherin_repeat 2246..2336 CDD:206637
Cadherin_repeat 2345..2445 CDD:206637
Cadherin_repeat 2453..2545 CDD:206637
Cadherin_repeat 2555..>2633 CDD:206637
Cadherin_repeat 2658..2759 CDD:206637
Cadherin_repeat 2774..2856 CDD:206637
Cadherin_repeat 2865..2963 CDD:206637
Cadherin_repeat 2974..3063 CDD:206637
Cadherin_repeat 3072..3165 CDD:206637
Cadherin_repeat 3173..3269 CDD:206637
Cadherin_repeat 3277..3374 CDD:206637
Cadherin_repeat 3383..3479 CDD:206637
Cadherin_repeat 3488..3579 CDD:206637
Cadherin_repeat 3590..3681 CDD:206637
EGF_CA 3866..3903 CDD:238011
Laminin_G_2 3953..4077 CDD:460494
EGF_CA <4121..4150 CDD:238011
EGF_CA 4152..4189 CDD:238011
EGF_CA 4195..4225 CDD:238011
EGF_CA 4227..4262 CDD:214542
pcdh2ab2NP_001009592.3 None
Blue background indicates that the domain is not in the aligned region.

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