DRSC/TRiP Functional Genomics Resources

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Protein Alignment kug and Cad88C

DIOPT Version :9

Sequence 1:NP_001027138.2 Gene:kug / 40191 FlyBaseID:FBgn0261574 Length:4699 Species:Drosophila melanogaster
Sequence 2:NP_731930.3 Gene:Cad88C / 41774 FlyBaseID:FBgn0038247 Length:1981 Species:Drosophila melanogaster


Alignment Length:2157 Identity:534/2157 - (24%)
Similarity:873/2157 - (40%) Gaps:474/2157 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   274 KTKVSISVKQVNFYAPEIFTK------TFSSVTPTSNPLIYGIVRVNDKDTGINGNIGRLEIVDG 332
            ::::.:.:|:    :||  ||      |.....|.::||.:|  :.|..|:    .|.|:|...|
  Fly    66 QSEIVLRLKE----SPE--TKVGTLIYTLKGYDPDNDPLTFG--KRNSHDS----EIIRIENTGG 118

  Fly   333 NPDGTFLLKA--AETKDEYYIELN-QFAHLNQQHFI-YNLTLLAEDLGTPRRFAYKSVPIQIKPE 393
            |....||.|.  .|.:|||.|.|. ..:|.:..::: .:..||.||:                  
  Fly   119 NEAKIFLAKELDRELQDEYAIVLTLTDSHYSDHNYVTQSFLLLVEDI------------------ 165

  Fly   394 SKNIPIFTQEIYEVSIPE-TAPINMPVIRLKVSDPDLGK--NALVYLEIVGGNEGDEFRI--NPD 453
            :.|:|.|......:.||| :||  ..|..|:.:|.|.|.  ..:.||:.:.| :.|.|.|  :..
  Fly   166 NDNVPTFLPYQNAIEIPEGSAP--GVVSTLEATDADEGAYGQVVYYLQELDG-DNDVFSIATHQG 227

  Fly   454 SGMLYTAKQLDAEKKSSYTLTVSAIDQANVGSRKQSSAKVKISVQDMNDNDPIFENVNKVISINE 518
            .|:|...|:||.|:||.|.|.|.|||:||.|.....:|.:.:.|:|:.|..|.|..|..|..|.|
  Fly   228 KGILRLQKELDYERKSLYQLRVLAIDRANQGPINTGTAAILVKVKDLEDQPPEFVEVQAVARIAE 292

  Fly   519 NNLAGSFVVKLTAKDRDSGENSYISYSIANLNAVPFEIDHFSGIVKTTSLLDFETM--KRNYELI 581
            :...|:.|:::.|.|.|.|.|:.|:||: ..|.: |:|:..:|||.|.:.||.|..  :.|...|
  Fly   293 DAPVGTKVLRVRAIDGDRGINNPIAYSL-EANDL-FDINPHTGIVHTLTKLDREEQSDQVNGAHI 355

  Fly   582 IRASDWGL--------PYRRQTEIKLSIVVKDINDNRPQFERVNCYGKVTKSAPMGTEVFVTSAI 638
            :|.|...|        |...:||:  :::|.|:||..|.|.......:|.::|...|.:   :.|
  Fly   356 LRISATELSKSNTQMAPTTVRTEV--TVIVSDVNDEIPTFGETVYRCEVNENAQTNTPL---NFI 415

  Fly   639 DFDAGDIISYRLSDGNEDGCFN--LDPTSGSLSISCDLKKTTLTNRILKVSATDGTHFSDDLIIN 701
            |.:..::: :...:|| :|.|.  |||                                      
  Fly   416 DEEVQNVV-FDHDEGN-NGTFRLFLDP-------------------------------------- 440

  Fly   702 VHLMPEDLGGDSSILHGFGSFECRETGVARRLAETLSLAEKN------NVKSASPSVFSDLSLT- 759
                |.||            ||         :...|::.|.|      |.||.....|::::.| 
  Fly   441 ----PNDL------------FE---------IVPELAVNEANFMLRVKNSKSLDFEQFTEVNFTI 480

  Fly   760 -------PSRYG----------QNVHRPEFVNFPQELSINESVQLGETVAWIEAKDRDLGYNGKL 807
                   |||:.          ||.:.|||.......|:.|:.:....:..::|.|.|.|..|.:
  Fly   481 FAREVDEPSRWSSAHVQIFIRDQNDNFPEFSQTIYNASVLENSEQDTIITHVQAVDVDSGDYGTM 545

  Fly   808 VFAISD--GDYDSVFRIDPDRGELQI--IG--YLDRERQNEYVLNITVYD-LGNPTKSTSKMLPI 865
            ....::  |....:..::|..|.:.|  .|  ..|||..:.:.|.:...| .|...::|:::: :
  Fly   546 GIRYTNLRGGIAHLLNLNPITGVITIKQAGGTAFDREIISRHYLTVEAIDNAGQGNRNTAQII-V 609

  Fly   866 TILDVNDNRPVI-QKTLATFRLTESARIGTVVHCLHATDAD-SGI-NAQVTYAL--SVECSDFTV 925
            .|||||||.|.. |:...|..|...|...|.:. |.|.||| :|. |:||||.:  .:..|:||:
  Fly   610 DILDVNDNAPTFPQRQYETKLLENQAEFETPLQ-LEARDADLNGTENSQVTYEIVEGLYRSNFTI 673

  Fly   926 NATTGCLRLNKPLDRE--------KQDNYA----------LHITAKDGGSPVLSSEALVYVLVDD 972
            :..:|.||.....|.|        :.|.|.          |.:.|:|.|.|:||:...|.:.|.|
  Fly   674 DPQSGLLRPVHSFDFEELVDGSSRRSDPYTGGSFSIREIDLLVRARDSGIPMLSTVVPVLIYVQD 738

  Fly   973 VNDNAPVFGVQEYIFKVREDLPRGTVLAVIEAVDED-IGPNAEIQFSLKEETQDEELFRIDKHTG 1036
            ||||||:|....|...|.||||.|:.:..:.|:|.| ..||..:.:.::....|:  |.|:..||
  Fly   739 VNDNAPIFQQSFYAKTVPEDLPGGSSVLQVTAIDRDGSAPNNVVVYRIQTGAGDK--FIINSETG 801

  Fly  1037 AIRTQ--GYLDYE----NKQVHNLIVSAIDG--GDPSLTSDMSIVIMIIDVNEN----RFAPEFD 1089
            .|...  ..||.:    .:.::.|.|.|:||  |:..|.:..::.|.|.|||..    :..|.. 
  Fly   802 VISVAHGANLDPDLTESKRSLYTLSVIALDGGLGNSQLMTTCTVNISIQDVNNKPPVLKEMPAL- 865

  Fly  1090 DFVYEGKVKENKPKGTFVMNVTARDMD-TVDLNSKITYSITGG-------------DGLGIFAVN 1140
                  ::.||.|.||.|..:.|.|:| ...|..|:......|             |.||.|.|:
  Fly   866 ------QILENTPVGTLVYRIQATDLDHKAILRYKLNPEHCEGRTEEGALVKSSEYDFLGAFEVD 924

  Fly  1141 D-QGSITSLSQLDAETKNFYWLTLCAQDCAIVPLSNCVEVY--IQVENENDNIPLTDKPVYYVNV 1202
            . :|::..:..||.|......|.:..:|.|........|.:  |||.:||||.|....|.|..::
  Fly   925 SIEGTLKVVKLLDRERVEHIKLAITVEDLAAAKGRQIAEGFLSIQVLDENDNNPKFRLPFYRQSI 989

  Fly  1203 TEASVENVEIITLKAFDPDIDPTQTITYNIVSGNLV--GYFEIDSKTGVIKTTERKLDRENQAEH 1265
            ||.|:....|:.:.|  .|:|..:|||| .:.||..  ....:|.:||.| ....|:|.|.....
  Fly   990 TENSINGAMIVNVLA--SDVDKNRTITY-ALEGNPTYRSLMHLDPQTGEI-VVASKIDHEQHQWL 1050

  Fly  1266 ILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVYKVQVPSSATVNQSIFQVHAIDSDSGE 1330
            ...|..:|:|.|..||...:.::|||.|||:|.|........:..:|.....:..:.|.|:|||:
  Fly  1051 NFSVRATDSGIPARSSLVDVYITVLDENDNNPYFVGGSKNYTISENAAPGTRVATLQAGDADSGD 1115

  Fly  1331 NGRITYSIKSGKGKNKFRIDSQRGHIHIAKPLD--SDNEFEIHIKAEDN----GIPKKSQTA--R 1387
            .|:||:.:.....:.||.||:..|.:.:|..||  |.:.:.:.|:|.||    .:..:|:.|  :
  Fly  1116 FGKITFLMDRISSQGKFTIDADTGVLTVADRLDRESKDSYNLVIEAWDNYQFGFLAGESRNAFKQ 1180

  Fly  1388 VNIVVVPVNPNSQNAPLIVRKTSENVVDLTENDKPGFLVTQILAVDDD-----NDQLWYNISNGN 1447
            |.|.::..|.|.....|.:     :.|.:||..:....|..|:..|.|     |.:|.:.|:.||
  Fly  1181 VFISILDENDNPPEVDLPM-----SCVLITEYHELHERVASIVGKDADDPTTPNGRLDFAITRGN 1240

  Fly  1448 DDNTFYIGQD---NGNILLSKYLDYETQQSYNLTISVTDGTFTA---FTNLLVQVIDINDNPPQF 1506
            .|..|.:.|.   |..|..||.| .....:|:|||:..|....|   ...|.:.|.|.||:.|.|
  Fly  1241 KDGMFELRQIDAWNAQIFASKSL-RNRYGNYSLTITTRDMGLPANIVHNTLDICVSDFNDHAPVF 1304

  Fly  1507 AKDVYH--VNISENIEEESVIMQLHATDRDEDKKLFYHLHATQDP-SSLALFRIDSISGNVIVTQ 1568
            .:.:::  |.|.||....::|:|.:|:|.|..:..........|| .|..:|.:|..:|.:.:.:
  Fly  1305 VRPLHNTTVRIPENATVGTLILQAYASDGDMGQNALVRYRLKPDPLGSYKMFEVDGSTGELFLKE 1369

  Fly  1569 RLDFEKTAQHILIVFVKDQGAP-GKRNYAKIIVNVHDHNDHHPEFTAKIIQSKVPESAAIGS--- 1629
            :|:.||...|.:.:...|||.| ...:...:.:.|.:.||:.|:|....|.....|.:..||   
  Fly  1370 QLNREKQKIHEIRIEAYDQGLPTSLSSDLDLTIYVRNVNDYEPQFMVNEISVNFTEHSDPGSERI 1434

  Fly  1630 KLAEVRAIDRD-------SGHNAEIQYSIITGNVGSVFEIDPTFGIITLAGNLNINKIQEYMLQV 1687
            ||.:  .||:|       :...:::.|.|:.||....|.:||...|:|:...|:...|..:.|.|
  Fly  1435 KLPD--TIDKDQLELDDPNDTPSQVCYFIVNGNEAGYFRLDPETHILTVDRELDREVIANFTLYV 1497

  Fly  1688 KAVD-LGNPPLSS-----QIPVHIIVTMSENDPPKFPTNNIAIEIFENLPIG--TFVTQVTARSS 1744
            :|.: ..|..:|.     ::.:.|              ||....|..|...|  .|......||:
  Fly  1498 RATENCRNDSISGGEKRRRMGIEI--------------NNRLGGIVHNQQFGYDRFKHSRQLRST 1548

  Fly  1745 SSIFF-----NIISGNINESFRINPSTGVIVINGNIDYESIKVFNLTVKGTNMAAESSCQNIIIH 1804
            .|..:     .::|....:|.:.:|:.|:...:..:|...|||                   .:.
  Fly  1549 ESNEYGPEDAELLSYEAYDSSQEDPTGGLATTHPELDSTVIKV-------------------KVR 1594

  Fly  1805 ILDANDNIPYFVQNEYVGALPESAAIGSYVLKVHDSSKDHLTLQVKDADVGVNGMVEYHIVDDLA 1869
            :||.|||.|.|....:.|.:..:|..|...::|          :..|||.|.||.:.|:.|.::.
  Fly  1595 VLDINDNPPRFRSKIFTGGITTNADFGLKFMRV----------EATDADEGDNGRIGYYQVGEIR 1649

  Fly  1870 KNF-----------FKIDSTTGAIELLRQLDYETNAG----YTFDVTVSDMGKPKLHSTTTAHVT 1919
            :..           |.:|..||.:    ||:::...|    :.|.|..:|....|    ..|||.
  Fly  1650 QTLSEGLENVRKAPFLLDQETGEV----QLNFDPQKGMKGYFDFVVLANDTSGMK----DVAHVF 1706

  Fly  1920 IRVIN-------VNDCPPVFNERELNVTLFLPTFENVF--------VRQVSAKDADNDTLRFD-- 1967
            |.::.       |....|  :|....|..|..|..|:.        ::....||...|..:.|  
  Fly  1707 IYLLREDQKVRFVFRLQP--DELRSRVDSFRDTLSNITESIVNIDEIKVHENKDGSVDKTKTDLY 1769

  Fly  1968 --IVDGNTNECFQIEKYTGIITTRNFEILNNENDRDYALHVRASDGIFSAILIVKIKVLSAIDSN 2030
              :|:...|..:::.:...:|.:                |:.:.:|:|        |.|:.:|:.
  Fly  1770 MHLVEREDNSIYEVSEVLKLIDS----------------HIESLNGLF--------KELNVLDTQ 1810

  Fly  2031 FAFQRESYRFSAFENNTKVATIGLVNVIGNTLDENVEYRILNPTQLFDIGISSGALKTTGVIFDR 2095
            .|                                        ..||...|.|.|.|....:..:.
  Fly  1811 AA----------------------------------------EAQLLTAGPSRGPLFVWLIFTNL 1835

  Fly  2096 EVKDLYRLFVEAKSMLYDGMNSNVRRAVTSI-----DISVLDVNDNCPLFVNMPYYATVSIDDPK 2155
            .:..|..:.:...:...:|....:|.|..:|     .:|:.|..:......|...::.      :
  Fly  1836 FLATLLVVTIALCASQRNGYRRQLRAAKVNIFRGHSSMSLQDAQEPATRVPNTNKHSV------Q 1894

  Fly  2156 GTIIMQVKAID---LDSAENGEV-----------------RYELKKGNGELFKLDRKSGELSIKQ 2200
            |:..:.:|..|   ..|.|:|.:                 .:|..||..:||   ..|.:|:  :
  Fly  1895 GSNPIWLKGYDNEWFKSEESGSIGGHDSLDDNFLAVATQDMHETLKGTAKLF---NNSNDLN--R 1954

  Fly  2201 HVEGHNRNYELT 2212
            |...:|:..::|
  Fly  1955 HFNLYNQIDKMT 1966

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kugNP_001027138.2 Cadherin_repeat 66..178 CDD:206637
Cadherin_repeat 187..285 CDD:206637 1/10 (10%)
E_set 309..390 CDD:298831 22/84 (26%)
Cadherin_repeat 404..503 CDD:206637 36/103 (35%)
Cadherin_repeat 513..609 CDD:206637 34/105 (32%)
Cadherin_repeat 622..708 CDD:206637 13/87 (15%)
Cadherin_repeat 776..873 CDD:206637 24/103 (23%)
Cadherin_repeat 883..976 CDD:206637 37/114 (32%)
Cadherin_repeat 984..1082 CDD:206637 32/106 (30%)
Cadherin_repeat 1092..1189 CDD:206637 30/113 (27%)
Cadherin_repeat 1197..1295 CDD:206637 31/99 (31%)
Cadherin_repeat 1303..1386 CDD:206637 23/88 (26%)
Cadherin_repeat 1413..1502 CDD:206637 30/99 (30%)
Cadherin_repeat 1510..1608 CDD:206637 25/101 (25%)
Cadherin_repeat 1621..1713 CDD:206637 25/107 (23%)
Cadherin_repeat 1724..1811 CDD:206637 18/93 (19%)
Cadherin_repeat 1819..1927 CDD:206637 28/129 (22%)
Cadherin_repeat 1948..2030 CDD:206637 14/93 (15%)
Cadherin_repeat 2037..2136 CDD:206637 13/103 (13%)
Cadherin_repeat 2144..2235 CDD:206637 16/89 (18%)
Cadherin_repeat 2246..2336 CDD:206637
Cadherin_repeat 2345..2445 CDD:206637
Cadherin_repeat 2453..2545 CDD:206637
Cadherin_repeat 2555..>2633 CDD:206637
Cadherin_repeat 2658..2759 CDD:206637
Cadherin_repeat 2774..2856 CDD:206637
Cadherin_repeat 2865..2963 CDD:206637
Cadherin_repeat 2974..3063 CDD:206637
Cadherin_repeat 3072..3165 CDD:206637
Cadherin_repeat 3173..3269 CDD:206637
Cadherin_repeat 3277..3374 CDD:206637
Cadherin_repeat 3383..3479 CDD:206637
Cadherin_repeat 3488..3579 CDD:206637
Cadherin_repeat 3590..3681 CDD:206637
EGF_CA 3866..3903 CDD:238011
Laminin_G_2 3953..4077 CDD:280389
EGF_CA <4121..4150 CDD:238011
EGF_CA 4152..4189 CDD:238011
EGF_CA 4195..4225 CDD:238011
EGF_CA 4227..4262 CDD:214542
Cad88CNP_731930.3 Cadherin_repeat 76..168 CDD:206637 30/117 (26%)
Cadherin_repeat 179..276 CDD:206637 36/99 (36%)
Cadherin_repeat 287..388 CDD:206637 33/104 (32%)
Cadherin_repeat 397..506 CDD:206637 30/176 (17%)
Cadherin_repeat 514..617 CDD:206637 24/103 (23%)
Cadherin_repeat 625..742 CDD:206637 37/117 (32%)
Cadherin_repeat 751..853 CDD:206637 30/103 (29%)
Cadherin_repeat 865..976 CDD:206637 30/117 (26%)
Cadherin_repeat 985..1080 CDD:206637 31/98 (32%)
Cadherin_repeat 1090..1191 CDD:206637 27/100 (27%)
CA 1221..1302 CDD:214520 26/81 (32%)
Cadherin_repeat 1312..1409 CDD:206637 24/96 (25%)
Cadherin_repeat 1418..>1502 CDD:206637 23/85 (27%)
Cadherin_repeat 1617..1710 CDD:206637 26/110 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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