DRSC/TRiP Functional Genomics Resources

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Protein Alignment kug and sshk-1

DIOPT Version :10

Sequence 1:NP_001027138.2 Gene:kug / 40191 FlyBaseID:FBgn0261574 Length:4699 Species:Drosophila melanogaster
Sequence 2:NP_508016.1 Gene:sshk-1 / 180363 WormBaseID:WBGene00011394 Length:84 Species:Caenorhabditis elegans


Alignment Length:67 Identity:21/67 - (31%)
Similarity:29/67 - (43%) Gaps:5/67 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly  4211 ISHCMCRGYTGPTC--EIDVDECENQPCGNGATCINE---PGSFRCICPSYLTGASCGDPLYSNS 4270
            :|.|:...:....|  ...:..|.||.|.||..|.|.   ||.:......|:..|.|.:|.||.|
 Worm     7 LSFCLLIAFAYSQCCSGAPLGMCINQHCPNGTMCNNNWCCPGCYDTCSNCYMYTAYCNNPYYSCS 71

  Fly  4271 IS 4272
            :|
 Worm    72 MS 73

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kugNP_001027138.2 Cadherin_repeat 66..178 CDD:206637
Cadherin_repeat 187..285 CDD:206637
Cadherin_repeat 404..503 CDD:206637
Cadherin_repeat 513..609 CDD:206637
Cadherin_repeat 622..708 CDD:206637
Cadherin_repeat 776..873 CDD:206637
Cadherin_repeat 883..976 CDD:206637
Cadherin_repeat 984..1082 CDD:206637
Cadherin_repeat 1092..1189 CDD:206637
Cadherin_repeat 1197..1295 CDD:206637
Cadherin_repeat 1303..1386 CDD:206637
Cadherin_repeat 1413..1502 CDD:206637
Cadherin_repeat 1510..1608 CDD:206637
Cadherin_repeat 1621..1713 CDD:206637
Cadherin_repeat 1724..1811 CDD:206637
Cadherin_repeat 1819..1927 CDD:206637
Cadherin_repeat 1948..2030 CDD:206637
Cadherin_repeat 2037..2136 CDD:206637
Cadherin_repeat 2144..2235 CDD:206637
Cadherin_repeat 2246..2336 CDD:206637
Cadherin_repeat 2345..2445 CDD:206637
Cadherin_repeat 2453..2545 CDD:206637
Cadherin_repeat 2555..>2633 CDD:206637
Cadherin_repeat 2658..2759 CDD:206637
Cadherin_repeat 2774..2856 CDD:206637
Cadherin_repeat 2865..2963 CDD:206637
Cadherin_repeat 2974..3063 CDD:206637
Cadherin_repeat 3072..3165 CDD:206637
Cadherin_repeat 3173..3269 CDD:206637
Cadherin_repeat 3277..3374 CDD:206637
Cadherin_repeat 3383..3479 CDD:206637
Cadherin_repeat 3488..3579 CDD:206637
Cadherin_repeat 3590..3681 CDD:206637
EGF_CA 3866..3903 CDD:238011
Laminin_G_2 3953..4077 CDD:460494
EGF_CA <4121..4150 CDD:238011
EGF_CA 4152..4189 CDD:238011
EGF_CA 4195..4225 CDD:238011 3/15 (20%)
EGF_CA 4227..4262 CDD:214542 12/37 (32%)
sshk-1NP_508016.1 None
Blue background indicates that the domain is not in the aligned region.

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