DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kug and fmi-1

DIOPT Version :10

Sequence 1:NP_001027138.2 Gene:kug / 40191 FlyBaseID:FBgn0261574 Length:4699 Species:Drosophila melanogaster
Sequence 2:NP_506256.3 Gene:fmi-1 / 179788 WormBaseID:WBGene00001475 Length:2596 Species:Caenorhabditis elegans


Alignment Length:1757 Identity:434/1757 - (24%)
Similarity:714/1757 - (40%) Gaps:359/1757 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  2757 DANIPTFEKSSVLLKIIESTPPGTVL--TKLHMIGNYTFKFSIAADQDH-----FMISD-SGELI 2813
            |||...|::...:.::.|.||..|::  .|.....:....:|:.|.||.     |.:.. |||:.
 Worm   159 DANAVHFQQEKYVKELPEDTPIETIIASVKASHASSQPLYYSMVAPQDSRSQNLFTLDTMSGEIR 223

  Fly  2814 LQQTLDREQQESHNLIVVAETSTVPVFFAYADVLIDVRDENDNYPKFDNTFYSASVAENSEKVIS 2878
            |.:::|||..:.|.|.|.|.....|...|...|::.|.|..||.|.|:...|...:.|::....:
 Worm   224 LAKSMDREVLDKHILKVTAYERVDPTISASTTVVVHVLDVQDNSPIFEKDSYFGEIREDAPIGTT 288

  Fly  2879 LVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWITLLTSLDREVQSEYNFKVIAADNG 2943
            ::.|.|.|.|:|.||:|.|.|...  |.:|:..|:..||.|.....||||..|.....|||:|.|
 Worm   289 VLSVFARDLDSGENGEIEYSLGEG--NGKNLLAINAKSGVIQTAAPLDRETLSLIRLDVIASDKG 351

  Fly  2944 HPKHDAKVPVTIKIVDYNDNAPVFKLPIEGLSVFENALPGTVLINLLLIDPDI-EKQEMDFFIVS 3007
            .||.::...|.|.:||.|||||||......:::.||.....|:..:...|.|. ...::.:.:.|
 Worm   352 TPKRESTAMVEITVVDVNDNAPVFASDSYNVTILENITIPAVIATVKATDEDFGTNGKVHYSMAS 416

  Fly  3008 GDKQAQFQIGKS-GELFIAKPLDREQLMFYNLSIIATDGKFTAKAN---VEIDVKDINDNTPYCL 3068
            ........|..| ||:.:.:.:|.:.... ...|.|.||...|.::   :.|:|.||||:.|..:
 Worm   417 SSGIGGLTIDYSTGEVTLRERIDAKNSPI-TAVIRAKDGAQPALSSTVPLTINVIDINDHAPTLI 480

  Fly  3069 KPRYHISTNESISIGTTLVEVKAIDFDFQSKLRFYLSGKGADDFSIGKESGILKVASALDRETTP 3133
            ..:..|:..|:::||..:..|.|||.|.........|.:|::||.|.::||::|....||||||.
 Worm   481 AAQKMITLEENVAIGEEVGRVYAIDEDSGPNGIIKYSMEGSEDFIIDEDSGLIKTTKLLDRETTA 545

  Fly  3134 KYKLVAHVQDGKDFTQECFSEIIITVNDINDNMPIFSMAQYRVSVPEDAQLNTLITKVHAMDKDF 3198
            :|.|....:|....:....:.|.:.:.|||||.|.|...:|.|::.|:....:.|..:.|:|.| 
 Worm   546 RYSLKVTARDMGTPSLNTSTTIAVVLKDINDNAPTFDKKEYNVTISEEMPRGSQIITLKAVDND- 609

  Fly  3199 GVNRQIKYSLMGENHDYFK---ISKSTGIIRLHKSLDRETISLFNLTVKAEDCGVPKLHSIATVA 3260
             .:::|.|.:...:.:.|.   |.....|:.:...|.|:...: .:.:.|.|.|  .|.....|.
 Worm   610 -EDQKITYRIEEADREVFSILDIGDQGAILSVSGELKRQDHKV-RVEISATDQG--GLQGRCVVN 670

  Fly  3261 VNILDINDNPPEFSMRQYSCKILENATHGTEVCKVYATSIDIGVNADIHYFIMSGNEQGKFKMDS 3325
            |.|.|:| :.|.|:...:|.||.|::..|..|..:.|...|.|.||.|.|.|.|..   .|::|.
 Worm   671 VFIDDVN-SAPYFNDHPFSVKIPEHSPIGYPVITLKAEDHDRGDNARIVYSIDSSQ---FFRIDP 731

  Fly  3326 TTGDLVLNATLDYEMSKFYFLTIQAIDGGTPPLSNNAYVNISILDINDNSPTFLQNLYRINVNED 3390
            ::||:.:::.||.|....:.:.:.|.|..:|||:.:..:.:.:.|||||||.|..:.|...::||
 Worm   732 SSGDISVSSDLDREDRATFSVIVTASDHASPPLNTSTQIEVILDDINDNSPQFTSSSYAATISED 796

  Fly  3391 IFVGSKILDVKATDEDSDVNGLVTYNIERGD---NIGQFSIDPKNGTISVSRPLDRETISHYTLE 3452
            |.||:..|.|.|.|.|...||:|.|.:....   :|..|.:|..:||:.||..||||..:...|.
 Worm   797 IPVGTSFLQVSAIDADIGPNGIVDYFLNESSSSPSIQLFRLDRTSGTLRVSSKLDREQFAVIVLP 861

  Fly  3453 IQACDQGDPQRCNSVPININILDTNDNAPIFSSSNYSVVLQENRLLGYVFLTFKISDADETPNTT 3517
            |.|.|:|.|....:..|.:.:.|.|||||.|...:|.:.:.||..:|....|....||||..| .
 Worm   862 IFARDRGTPSLSAASEITLTLSDVNDNAPTFEQLSYDLYIAENSPVGSTVGTIVARDADEGDN-A 925

  Fly  3518 PYTFDIRSGNEGGLFRLEQD----GSLR--TASRFNHNLQ-DEFVIQVRVFDNGTPPLYSDAWVV 3575
            ..:|.|..|.:..||.:|:|    |.:|  |.:.|::..: ::|..:::.   .:..|.|...|.
 Worm   926 DISFRIFGGADAKLFDIEEDAEQNGVVRILTRAEFDYEAKANKFFFELQA---SSGQLSSTVPVR 987

  Fly  3576 VKIIEESQYPPIVTPLEVTINSFEDDFSGAFIGKVHASDQDKYDELNFSLVSGPDDMYQSSKLFN 3640
            :.:.:.:...|.:....:.:|.|::......||.:.|.|.|:...|.:.|..  :|:.::.|.  
 Worm   988 IHVSDVNDNKPALKDFVILMNRFDNVQMARQIGFIPAFDPDQNATLEYFLEE--NDLIEAEKY-- 1048

  Fly  3641 ISNNTGKIYAIS----NLDIGLYKLNVSVSDGKFHVFSIVKINVELVTNDMLKESVVIRFRRISA 3701
                ||||....    |:|:   .....||||.....|..:....||..:.|.||..:...|::.
 Worm  1049 ----TGKILVKQEWKRNMDV---SFKTCVSDGANTECSTCRFIHVLVEPEWLSESFTLSLARMTV 1106

  Fly  3702 SEF---LLSHRKTFMRSIRNIMRCRQKDVILITLQSDYQKASQHAVGNRRARSIDSDLNVVFAV- 3762
            .:|   |:..|      .|:.|.         || |:::.:..|.:|.:  :.:|..:.:..|: 
 Worm  1107 DDFWDPLVFQR------FRDAMS---------TL-SNWKPSDIHVIGVK--QHLDDVIYINIAIT 1153

  Fly  3763 ---------RKQQIIPDSDEFFTSDEIRQTLIDKKNEIENETNLVVEDVLPSTCQSNKNDCVH-G 3817
                     |..:::.:|.:                ::|..|.|.||.:...:|.:  ..|.| .
 Worm  1154 DHGRVVRGWRAIELVKESIK----------------KLEKMTLLQVEVIRDESCAN--EPCSHMA 1200

  Fly  3818 ECKQILQILKNNVTTTFTDVISFAAPSYIPVNT--CVCRPGF--DGKH--CKETVNACSTDPCSP 3876
            :|:| .|.....:....||  :|.|.:...|||  |.|..||  .|.|  |...::.|....||.
 Worm  1201 KCRQ-TQKFVGEMKAHETD--NFIARTLNTVNTFVCECPSGFTSSGAHGDCDTRIDECYRGRCSN 1262

  Fly  3877 QRICMPSGSALGYQCVCPKGFSGTYCE----------------------RKSSKC---------S 3910
            ...|:...:.  |||.|..|:.|.:||                      ....||         :
 Worm  1263 NSTCVAFENT--YQCECKPGWIGRHCEISVHALTCVPGYCMSDSLCELDGNQMKCRHCKYHGEDT 1325

  Fly  3911 NESCDMGLFTAVSFGGKSYAHYKINKVKAKFTLENGFSYSLQIRTVQQTGTLLYASGK-VDYNIL 3974
            :|.|.:   .:|||.|:...:..::..:.::|::      .::.|:...|.|::...| .|:..:
 Worm  1326 DERCRL---RSVSFDGEGLLNVNLDLPRTQWTMK------FRVSTIAHNGVLVFTGDKRSDFVEV 1381

  Fly  3975 EIINGAVQYRFDLGSGEGVISVSSIN----ISDGEWHQISLERSLNSAKVMVD----NKHVSHGS 4031
            .:::..::.:|.|| ||.:.:....:    |:|||||.::||.|.....:.:|    |..:...:
 Worm  1382 SVVDRVLKVQFSLG-GEKIDAKMENDVENRINDGEWHTVALEYSNKQITMSLDDCETNPSLLLNT 1445

  Fly  4032 AP--GVNGILNIQ----------------SNDIFVGAEVRPHPSIIGYEDIQRGFIGCMANIKIA 4078
            :|  .:...||::                ||.:|:|.  ||..|    :.|::.|.||::::.:.
 Worm  1446 SPNCAIRAKLNLEKKCEDPTVPCYRYLDISNGLFLGG--RPGTS----KQIEKAFSGCISDLSVD 1504

  Fly  4079 KESLPLYISGGSTIAALKRFTNVEFKCDPSNVLVRLGICGSQPCANSGICKELDTDVFECACQPR 4143
            ||.:..     |||..:.:...|...|..     |...|.:    :.|.|....      .|..|
 Worm  1505 KEDVDF-----STIKEMHKVGQVHEGCKH-----RKDFCST----SDGQCSATS------KCVNR 1549

  Fly  4144 YSGKHCEIDLDPCSSGPC-------------LF------------------------GGRCD--- 4168
            :.|:.|.......|:|.|             ||                        ..|.|   
 Worm  1550 WGGRICSCPQSVHSTGECVGALGTQDLRGHSLFEEESFVLYQPSQVSVPFEVSFEFRTSRADMQV 1614

  Fly  4169 ----------------------------------------------------------------- 4168
                                                                             
 Worm  1615 FALEFTQRSVHYNLEVDDGTLKYNIGDSEVELPAPEVTSKHWMNVVIKFEADSVATSINGIYSAE 1679

  Fly  4169 -------------YHG-------PNNY-SCTCPIHLSGKRCEYGK-------FCTPNPCKNGGIC 4205
                         |.|       |:.: .|...:.:.|:.....|       ...||.|....||
 Worm  1680 AKASISDMNLESLYFGIAPGTGHPSRFEGCIRNVLVDGRSISVKKKGKTRAGCVVPNRCSVDSIC 1744

  Fly  4206 EEGDGISH-------CMC-RGYTGPTCEIDVDECENQPCGNGATCI--NEPGSFRCICPSYLTGA 4260
             ..:...|       |.| :.:.|.|| :.|....| .|.:| ||:  |....:.||||:..||.
 Worm  1745 -PAESTCHRAWNKHKCKCHKSFVGDTC-LPVCSVAN-VCSSG-TCVSSNTTAGYECICPAGKTGK 1805

  Fly  4261 SC 4262
            :|
 Worm  1806 NC 1807

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kugNP_001027138.2 Cadherin_repeat 66..178 CDD:206637
Cadherin_repeat 187..285 CDD:206637
Cadherin_repeat 404..503 CDD:206637
Cadherin_repeat 513..609 CDD:206637
Cadherin_repeat 622..708 CDD:206637
Cadherin_repeat 776..873 CDD:206637
Cadherin_repeat 883..976 CDD:206637
Cadherin_repeat 984..1082 CDD:206637
Cadherin_repeat 1092..1189 CDD:206637
Cadherin_repeat 1197..1295 CDD:206637
Cadherin_repeat 1303..1386 CDD:206637
Cadherin_repeat 1413..1502 CDD:206637
Cadherin_repeat 1510..1608 CDD:206637
Cadherin_repeat 1621..1713 CDD:206637
Cadherin_repeat 1724..1811 CDD:206637
Cadherin_repeat 1819..1927 CDD:206637
Cadherin_repeat 1948..2030 CDD:206637
Cadherin_repeat 2037..2136 CDD:206637
Cadherin_repeat 2144..2235 CDD:206637
Cadherin_repeat 2246..2336 CDD:206637
Cadherin_repeat 2345..2445 CDD:206637
Cadherin_repeat 2453..2545 CDD:206637
Cadherin_repeat 2555..>2633 CDD:206637
Cadherin_repeat 2658..2759 CDD:206637 1/1 (100%)
Cadherin_repeat 2774..2856 CDD:206637 26/89 (29%)
Cadherin_repeat 2865..2963 CDD:206637 35/97 (36%)
Cadherin_repeat 2974..3063 CDD:206637 21/93 (23%)
Cadherin_repeat 3072..3165 CDD:206637 30/92 (33%)
Cadherin_repeat 3173..3269 CDD:206637 23/98 (23%)
Cadherin_repeat 3277..3374 CDD:206637 30/96 (31%)
Cadherin_repeat 3383..3479 CDD:206637 35/98 (36%)
Cadherin_repeat 3488..3579 CDD:206637 25/97 (26%)
Cadherin_repeat 3590..3681 CDD:206637 22/94 (23%)
EGF_CA 3866..3903 CDD:238011 10/36 (28%)
Laminin_G_2 3953..4077 CDD:460494 35/150 (23%)
EGF_CA <4121..4150 CDD:238011 5/28 (18%)
EGF_CA 4152..4189 CDD:238011 12/162 (7%)
EGF_CA 4195..4225 CDD:238011 10/37 (27%)
EGF_CA 4227..4262 CDD:214542 13/36 (36%)
fmi-1NP_506256.3 Cadherin_repeat 170..266 CDD:206637 26/95 (27%)
Cadherin_repeat 274..371 CDD:206637 35/98 (36%)
Cadherin_repeat 379..475 CDD:206637 21/96 (22%)
Cadherin_repeat 486..577 CDD:206637 30/90 (33%)
Cadherin_repeat 686..780 CDD:206637 30/96 (31%)
Cadherin_repeat 788..888 CDD:206637 35/99 (35%)
Cadherin_repeat 896..996 CDD:206637 25/103 (24%)
EGF_CA 1252..1287 CDD:238011 10/36 (28%)
LamG 1333..1504 CDD:238058 40/183 (22%)
LamG 1582..1716 CDD:238058 7/133 (5%)
EGF_CA 1774..1808 CDD:238011 13/36 (36%)
EGF_Lam 1865..1911 CDD:238012
HormR 1917..1974 CDD:214468
GPS 2170..2218 CDD:197639
7tm_GPCRs 2237..2455 CDD:475119
TM helix 2 2258..2283 CDD:410628
TM helix 3 2289..2311 CDD:410628
TM helix 4 2328..2344 CDD:410628
TM helix 5 2356..2377 CDD:410628
TM helix 6 2404..2435 CDD:410628
Blue background indicates that the domain is not in the aligned region.

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