DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7668 and Angptl3

DIOPT Version :10

Sequence 1:NP_649170.1 Gene:CG7668 / 40190 FlyBaseID:FBgn0036929 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_001386181.1 Gene:Angptl3 / 502970 RGDID:1564505 Length:455 Species:Rattus norvegicus


Alignment Length:471 Identity:112/471 - (23%)
Similarity:202/471 - (42%) Gaps:95/471 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 NSRSSPD----SSTENNSSSSDSEMEFVGTSARGMLK---------HKKKDE------------- 50
            :||..||    .|..:...|..:.::.|...|.|:|:         ||.|.:             
  Rat    16 SSRVDPDLSPFDSVPSEPKSRFAMLDDVKILANGLLQLGHGLKDFVHKTKGQINDIFQKLNIFDQ 80

  Fly    51 --RKISELTRKLAEAEINLKAQQEKGSILENCIKDKDDFIKTLQLSIDLVTQTKEMTIQK--LQT 111
              ..:|..|.::.|.|..|:....|       ::.|::.:|  .:|::|.::.:.:..:|  ||.
  Rat    81 CFYDLSLQTNEIKEEEKELRRTTSK-------LQVKNEEVK--NMSLELNSKLESLLEEKMALQH 136

  Fly   112 QIMDLQSDLDLSRITIKKNDGGNCAPAHDKVVKERKELNMENGKFREGNDQIVEIEKILNSKEAE 176
            ::..|:..|    .::.:|..|  |..|.:|...:..:..::...||....:.|..|.|:.:..:
  Rat   137 RVRALEEQL----TSLVQNPPG--AREHPEVTSLKSFVEQQDNSIRELLQSVEEQYKQLSQQHIQ 195

  Fly   177 IARLEFKIDE------------SKLKIVQLEGAVKAKDEKIVKMTEILSEYNV--NNKDHDEFVL 227
            |..:|.::.:            ||.:..:....:..|:.|.::..::.::.:.  |..:|     
  Rat   196 IKEIENQLRKTGIQEPTENSLYSKPRAPRTTPPLHLKEAKNIEQDDLPADCSAIYNRGEH----- 255

  Fly   228 LGSSKLPSIKLVTLPDFEPFASVFEDIPSAGRGWMIIQRRIDGSFD-NATESNIITGCGDLGGEF 291
              :|.:.:|:    |......:|:.|..| |....:||.|.|||.: |.|..|...|.|.|.|||
  Rat   256 --TSGVYTIR----PSSSQVFNVYCDTQS-GTPRTLIQHRKDGSQNFNQTWENYEKGFGRLDGEF 313

  Fly   292 WLGLQKLHKMTTHRRMELYIQLVDFDNASAYARYDNFVIGDEKQKYKLLSLGEYSGNAGDAFRSH 356
            ||||:|::.:.......|.::|.|:.::..||.| :|.:|:.:..| .|.:.|.:.|..:|...|
  Rat   314 WLGLEKIYAIVKQSNYILRLELQDWKDSKHYAEY-SFHLGNHETNY-TLHVAEIAANIPEALPEH 376

  Fly   357 -------INHIIVGNPFAME--SSKWWGTMNC---NLNGKYR--NSKVELDTTDGIWW---GNWN 404
                   .:|...|..:..|  |..||.:..|   ||||||.  .:|.:.:...||.|   |   
  Rat   377 RDLMFSTWDHRAKGQLYCPESYSGGWWFSDMCGENNLNGKYNKPRAKSKPERRRGISWRPRG--- 438

  Fly   405 VGNRYPLKSCKMLIRP 420
             |..|.:||.||:::|
  Rat   439 -GKLYSIKSSKMMLQP 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7668NP_649170.1 GumC <52..>242 CDD:442439 35/205 (17%)
FReD 245..421 CDD:412152 63/194 (32%)
Angptl3NP_001386181.1 GumC <90..>205 CDD:442439 25/129 (19%)
FReD 241..453 CDD:238040 67/229 (29%)

Return to query results.
Submit another query.