DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7668 and col11a2

DIOPT Version :9

Sequence 1:NP_649170.1 Gene:CG7668 / 40190 FlyBaseID:FBgn0036929 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_001005799.1 Gene:col11a2 / 448277 XenbaseID:XB-GENE-12564499 Length:340 Species:Xenopus tropicalis


Alignment Length:184 Identity:59/184 - (32%)
Similarity:88/184 - (47%) Gaps:20/184 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 DIPSAGRGWMIIQRRIDGSFDNATE-SNIITGCGDLGGEFWLGLQKLHKMTTHRRMELYIQLVDF 316
            |:.:.|.||::.|||:|||.|...: .:...|.|....|||||.:.:|::|:....:|...|.||
 Frog   159 DMDTDGGGWIVFQRRVDGSVDFYRDWKSYKQGFGSQLSEFWLGNENIHRLTSSGNFQLRFDLEDF 223

  Fly   317 DNASAYARYDNFVIGDEKQKYKLLSLGEYSGN-AGDAFRSHINHII----VGNPFAMESS----- 371
            ||...||.|..|.:..|.|.| .|...|::|. |||:..:|.:...    ..|..|.:::     
 Frog   224 DNNRTYATYSQFRLEPESQNY-TLRFREFTGGPAGDSLFTHKDRAFSTKDADNDPASKTNCAERY 287

  Fly   372 --KWW--GTMNCNLNGKYRNSKVELDTTD-GIWWGNWNVGNRYPLKSCKMLIRP 420
              .||  ...:..|||:|...  :.|..| |:.|..:. |..|.||..:|.:||
 Frog   288 KGAWWYESCYHSCLNGEYMRG--QHDKADGGVHWAKFR-GVNYSLKVSEMKLRP 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7668NP_649170.1 DUF16 146..>212 CDD:279814
FReD 245..421 CDD:294064 59/184 (32%)
col11a2NP_001005799.1 Collagen 45..110 CDD:189968
FReD 128..338 CDD:238040 57/182 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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