DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7668 and Tnr

DIOPT Version :9

Sequence 1:NP_649170.1 Gene:CG7668 / 40190 FlyBaseID:FBgn0036929 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_037177.2 Gene:Tnr / 25567 RGDID:3886 Length:1358 Species:Rattus norvegicus


Alignment Length:190 Identity:64/190 - (33%)
Similarity:94/190 - (49%) Gaps:32/190 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 VFEDIPSAGRGWMIIQRRIDGSFDNATE-SNIITGCGDLGGEFWLGLQKLHKMTTHRRMELYIQL 313
            |:.|:.:.|.||::.|||.:|..|...: ::...|.|:|..||||||..:|::|...|.||.:.:
  Rat  1166 VYCDMTTDGGGWIVFQRRQNGQTDFFRKWADYRVGFGNLEDEFWLGLDNIHRITAQGRYELRVDM 1230

  Fly   314 VDFDNASAYARYDNFVIGDEKQKYKLLSLGEYSGNAGDAFRSHINHIIVGNPFAME--------- 369
            .|...| .:|.||.|.:.|.:..|| |.:|.|:|.|||:...|     .|.||:.|         
  Rat  1231 RDGQEA-VFAYYDKFAVEDSRSLYK-LRIGGYNGTAGDSLSYH-----QGRPFSTEDRDNDVAVT 1288

  Fly   370 ------SSKWWGTMNC---NLNGKYRNSKVELDTTDGIWWGNWNVGNRYPLKSCKMLIRP 420
                  ...|| ..||   ||||||..|:    .:.||.|.:|. |:.:.:...:|.:||
  Rat  1289 NCAMSYKGAWW-YKNCHRTNLNGKYGESR----HSQGINWYHWK-GHEFSIPFVEMKMRP 1342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7668NP_649170.1 DUF16 146..>212 CDD:279814
FReD 245..421 CDD:294064 64/190 (34%)
TnrNP_037177.2 exchanger_TraA <190..>328 CDD:411343
EGF_Tenascin 203..231 CDD:376143
fn3 328..398 CDD:394996
fn3 416..496 CDD:394996
fn3 507..586 CDD:394996
FN3 595..679 CDD:238020
fn3 687..766 CDD:394996
fn3 776..855 CDD:394996
fn3 865..944 CDD:394996
fn3 954..1026 CDD:394996
FN3 1042..1127 CDD:238020
FReD 1134..1342 CDD:238040 62/188 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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