DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tom20 and tomm-20

DIOPT Version :9

Sequence 1:NP_001262085.1 Gene:Tom20 / 40189 FlyBaseID:FBgn0036928 Length:171 Species:Drosophila melanogaster
Sequence 2:NP_506092.1 Gene:tomm-20 / 179691 WormBaseID:WBGene00009092 Length:188 Species:Caenorhabditis elegans


Alignment Length:191 Identity:66/191 - (34%)
Similarity:104/191 - (54%) Gaps:27/191 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIEMNKTAIGIAAGVAGTLFIGYCIYFDKKRRSDPEYKKKVRERRRRNKKTG---------TAKS 56
            ::..||:.:.:|||:||..|:|||||||.||.:.|:||.|:|::||.....|         ....
 Worm     5 ILGFNKSNVVLAAGIAGAAFLGYCIYFDHKRINAPDYKDKIRQKRRAQAGAGGMAPRRPAAAGND 69

  Fly    57 GVPNLNDHEAIERYFLQEIQLGETLIARGDFESGVEHLANAIVVCGQPARLLQVLQSSLPAQVFA 121
            ..|::.|...::|:||||:||||.|:|.|:.:.|..|:|||:::||:..:||.:.|.:|....|.
 Worm    70 AAPDVTDPSQMQRFFLQEVQLGEELMAAGNVDEGAVHIANAVMLCGESQQLLSIFQQTLSEDQFR 134

  Fly   122 MLIVKM--------QEFGNRAAEG-NDGPIV--LGQSSEQQLDGAKIIECSSGNASIDDLE 171
            .::.::        :.||.:|.|. |:.|:|  ||       ||....:........||||
 Worm   135 AVVQQLPSTRERLAEMFGAKADEAENEPPMVQYLG-------DGPPPAQIQELIDDTDDLE 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tom20NP_001262085.1 MAS20 13..124 CDD:396581 48/119 (40%)
tomm-20NP_506092.1 3a0801s04tom 5..141 CDD:273378 51/135 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167176
Domainoid 1 1.000 106 1.000 Domainoid score I4105
eggNOG 1 0.900 - - E1_KOG4056
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H44649
Inparanoid 1 1.050 116 1.000 Inparanoid score I3382
Isobase 1 0.950 - 0.930827 Normalized mean entropy S1542
OMA 1 1.010 - - QHG52437
OrthoDB 1 1.010 - - D1316067at2759
OrthoFinder 1 1.000 - - FOG0002763
OrthoInspector 1 1.000 - - otm14316
orthoMCL 1 0.900 - - OOG6_104980
Panther 1 1.100 - - LDO PTHR12430
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1534
SonicParanoid 1 1.000 - - X2147
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1716.790

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