DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gabat and UGA1

DIOPT Version :10

Sequence 1:NP_649168.2 Gene:Gabat / 40188 FlyBaseID:FBgn0036927 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_011533.3 Gene:UGA1 / 852902 SGDID:S000003251 Length:471 Species:Saccharomyces cerevisiae


Alignment Length:459 Identity:218/459 - (47%)
Similarity:305/459 - (66%) Gaps:7/459 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 EPKEPVVKTKSIPGPKSIELKKQLDSVQATGTIQFFADYEKSIGNYIYDVDGNILLDVYTQISSV 91
            ||.:|.|||:|||||:|.:..|:|..|..|....|.||||||:||||.|||||..||:|.||||:
Yeast    11 EPTKPTVKTESIPGPESQKQLKELGEVFDTRPAYFLADYEKSLGNYITDVDGNTYLDLYAQISSI 75

  Fly    92 PLGYNHPRLYKVFNNEQNLKTLINRPALGVFPGKEWPEKLHSVLLNIAPKGLNKITTMMCGSCSN 156
            .||||:|.|.|...:.:.::.|::|||||.||.|:. :|:...:|..||||.:.:.:.:.|:.:|
Yeast    76 ALGYNNPALIKAAQSPEMIRALVDRPALGNFPSKDL-DKILKQILKSAPKGQDHVWSGLSGADAN 139

  Fly   157 ENAYKSIFIWYQNKLRG-NAPLTEQEKNSCMINIPPGAPKLSILSFKGAFHGRTLGALSTTHSKY 220
            |.|:|:.||:|:.|.|| :|..:|:|..|.|.|..||||.|::||||.|||||...:.|||.||.
Yeast   140 ELAFKAAFIYYRAKQRGYDADFSEKENLSVMDNDAPGAPHLAVLSFKRAFHGRLFASGSTTCSKP 204

  Fly   221 IHKLDVPSFDWPIASFPEYRYPLDENVAHNKKEDEKCLSEVQDLIQQYASKNPVAGIVVEPIQSE 285
            |||||.|:|.||.|.:|.|:||||||...|:|||:.||:.|::||:.::.  |||.:::||||||
Yeast   205 IHKLDFPAFHWPHAEYPSYQYPLDENSDANRKEDDHCLAIVEELIKTWSI--PVAALIIEPIQSE 267

  Fly   286 GGDNEASPEFFRSLQAICKKNGIALLIDEVQTGGGSTGKFWAHEHFELESPPDVVTFSKKLQLGG 350
            ||||.||..|.:.|:.|..|..:..:|||||||.|:|||.|.||:.:::.|.|:||||||.|..|
Yeast   268 GGDNHASKYFLQKLRDITLKYNVVYIIDEVQTGVGATGKLWCHEYADIQPPVDLVTFSKKFQSAG 332

  Fly   351 Y-FHNDDFIPNEPYRIFNTWMGDPGKVLLLEEVVKVIQEEKLLANVDVAGKVLKNGLLSLEKEFP 414
            | ||:..||||:|||.||||.|:|.::::...:.:.|.::||.......|..|...|..|:|::|
Yeast   333 YFFHDPKFIPNKPYRQFNTWCGEPARMIIAGAIGQEISDKKLTEQCSRVGDYLFKKLEGLQKKYP 397

  Fly   415 HILNSTR--GRGTFLAVNCTNTKVRDQIIGALKLHGIQTGGCGEISIRFRPALIFKEYHANIVLD 477
            ....:.|  |||||:|.:....:.||.::..|||:|...|||...::|.||:|.|:|.||:|.::
Yeast   398 ENFQNLRGKGRGTFIAWDLPTGEKRDLLLKKLKLNGCNVGGCAVHAVRLRPSLTFEEKHADIFIE 462

  Fly   478 RFRK 481
            ...|
Yeast   463 ALAK 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GabatNP_649168.2 AAT_I 27..483 CDD:450240 218/459 (47%)
UGA1NP_011533.3 GABAtrns_euk 5..468 CDD:129782 218/459 (47%)

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