DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gabat and Agxt2

DIOPT Version :10

Sequence 1:NP_649168.2 Gene:Gabat / 40188 FlyBaseID:FBgn0036927 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_114023.1 Gene:Agxt2 / 83784 RGDID:621767 Length:512 Species:Rattus norvegicus


Alignment Length:470 Identity:115/470 - (24%)
Similarity:187/470 - (39%) Gaps:117/470 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 YIYDVDGNILLDVYTQISSVPLGYNHPRLYKVFNNEQNLKTLINR--PALGVF---PGKEWPEKL 131
            :::|.:||..||.::.|.:|.:|:.||::..|      .|..::|  ....||   |..|:.|:|
  Rat    93 WLFDSEGNRYLDFFSGIVTVGVGHCHPKVTAV------AKKQMDRLWHTSSVFFHSPMHEYAERL 151

  Fly   132 HSVLLNIAPKGLNKITTMMCGSCSNENAYKSIFIWYQNKLRGNAPLTEQEKNSCMINIPPGAPKL 196
            .::|    |:.|..|..:..||.:|:.|                          |:.....:...
  Rat   152 SALL----PEPLKVIFLVNSGSEANDLA--------------------------MVMARAYSNHT 186

  Fly   197 SILSFKGAFHG---RTLGALSTTHSKYIHKLDVPSFDWPIA----SFPE-YRYP------LDENV 247
            .|:||:||:||   .|||..:..    |:|:.|||   .||    ..|: :|.|      .|..|
  Rat   187 DIISFRGAYHGCSPYTLGLTNVG----IYKMKVPS---TIACQSTMCPDVFRGPWGGSHCRDSPV 244

  Fly   248 AHNKK---------EDEKCLSEVQDLIQQYASKNPVAGIVVEPIQSEGGDNEASPEFFRSLQAIC 303
            ...:|         ..|:.:.:.:|.:....:.: :||...||||...|..:...||.:...|:.
  Rat   245 QTVRKCSCAPDGCQAKERYIEQFKDTLNTSVATS-IAGFFAEPIQGVNGVVQYPKEFLKEAFALV 308

  Fly   304 KKNGIALLIDEVQTGGGSTGK-FWAHE-HFELESPPDVVTFSKKL-----------------QLG 349
            ::.|...:.||||||.|..|. ||..: |   ::.||:||.:|.:                 .|.
  Rat   309 RERGGVCIADEVQTGFGRLGSHFWGFQTH---DTMPDIVTMAKGIGNGFPMAAVVTTPEIASSLA 370

  Fly   350 GYFHNDDFIPNEPYRIFNTWMGDPGKVLLLEEVVKVIQEEKLLANVDVAGKVLKNGLLSLEKEFP 414
            .:.|:           |:|:.|.|....:...|::||:||.|..|....|..:......|..|| 
  Rat   371 KHLHH-----------FSTFGGSPLACAIGSAVLEVIEEENLQRNSQEVGTYMLLKFAKLRDEF- 423

  Fly   415 HILNSTRGRGTFLAVNCTNTKVR---------DQIIGALKLHGIQTGGCGEISIRFR--PALIFK 468
            .|:...||:|..:.:.....|:.         :||....|..|:..|..|..|..||  |.:...
  Rat   424 DIVGDVRGKGLMVGIEMVQDKISRQPLPKTEVNQIHEDCKDMGLLVGRGGNFSQTFRIAPPMRVT 488

  Fly   469 EYHANIVLDRFRKVL 483
            :...:...:.||..|
  Rat   489 KLEVDFAFEVFRSAL 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GabatNP_649168.2 AAT_I 27..483 CDD:450240 114/468 (24%)
Agxt2NP_114023.1 ArgD 64..505 CDD:439930 115/470 (24%)

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