DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gabat and Phykpl

DIOPT Version :9

Sequence 1:NP_001163479.1 Gene:Gabat / 40188 FlyBaseID:FBgn0036927 Length:486 Species:Drosophila melanogaster
Sequence 2:XP_006534386.1 Gene:Phykpl / 72947 MGIID:1920197 Length:486 Species:Mus musculus


Alignment Length:500 Identity:111/500 - (22%)
Similarity:190/500 - (38%) Gaps:131/500 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 SIELKKQLDSVQATGTIQFFADYEKSI---GNYIYDVDGNILLDVYTQIS-SVPL--GYNHPRLY 101
            :::|:::|  :.::..:.|..|..|.|   |.|:||..|...||....:: ..||  |:.||.:.
Mouse    11 TLDLRRRL--LSSSCRLFFPEDPVKIIRGQGQYLYDEQGREYLDCINNVAHDAPLAVGHCHPTVV 73

  Fly   102 KVFNNEQNLKTLINRPALGVFPGKEWPEKLHSVLLNIA-------PKGLNKITTMMCGSCSNENA 159
            :. .:||||....|            ...||..:::.|       |:.|:....:..||.:|:.|
Mouse    74 QA-AHEQNLVLNTN------------SRYLHDNIVDYAQRLSETLPEQLSVFYFLNSGSEANDLA 125

  Fly   160 ---------YKSIFIW---YQNKLRGNAPLTEQEKNSCMINIPPGAPKLSILSFKGAFHGRTLGA 212
                     ::.:.:.   |...|            |.:|:|.|             :..|.||.
Mouse   126 LRLARQYTGHQDVVVLDHAYHGHL------------SSLIDISP-------------YKFRNLGG 165

  Fly   213 LSTTHSKYIHKLDVPSFDWPIASFPE-YRYPLDENVAHNKKEDEKCLSEVQDLIQQYASK-NPVA 275
                ..:::|          :|..|: ||.|..|:   :....|...:||:.:|.....| ..:|
Mouse   166 ----QKEWVH----------VAPLPDTYRGPYRED---HPNPAEAYANEVKHVISSAQQKGRKIA 213

  Fly   276 GIVVEPIQSEGGDNEASPEFFRSLQAICKKNGIALLIDEVQTGGGSTGK-FWAHEHFELESP--- 336
            ....|.:.|..|.......:|..:.....:.|...:.||:|.|.|..|| |||   |:||..   
Mouse   214 AFFAESLPSVSGQIIPPAGYFSQVAEHIHRAGGLFVADEIQVGFGRIGKHFWA---FQLEGEDFV 275

  Fly   337 PDVVTFSKKLQLGGYFHNDDFIPNEP------------------YRIFNTWMGDPGKVLLLEEVV 383
            ||:||..|.:..|           .|                  ...|||:.|:|....:...|:
Mouse   276 PDIVTMGKSIGNG-----------HPVACMATTQAVSRAFEATGVEYFNTFGGNPVSCAVGLAVL 329

  Fly   384 KVIQEEKLLANVDVAGKVLKNGLLSLEKEFPHILNSTRGRGTFLAVNCTN--------TKVRDQI 440
            .|::.|:|.|:....|..|...|...:.:.| |:...||.|.|:.|:...        |:..:.:
Mouse   330 DVLKTEQLQAHATNVGSFLLEHLTQQKAKHP-IIGDVRGTGLFIGVDLIKDETLRTPATEEAEYL 393

  Fly   441 IGALKLHGI--QTGGCGEISIRFRPALIFKEYHANIVLDRFRKVL 483
            :..||.:.|  ...|.|:..::|:|.:.|...:|..|:.:...:|
Mouse   394 VSRLKENYILLSIDGPGKNILKFKPPMCFNVDNAQHVVAKLDDIL 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GabatNP_001163479.1 GabT 27..484 CDD:223238 110/499 (22%)
AAT_I 27..483 CDD:302748 110/498 (22%)
PhykplXP_006534386.1 PRK06148 <1..438 CDD:180426 110/498 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0160
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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