DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gabat and Etnppl

DIOPT Version :9

Sequence 1:NP_001163479.1 Gene:Gabat / 40188 FlyBaseID:FBgn0036927 Length:486 Species:Drosophila melanogaster
Sequence 2:XP_003749444.1 Gene:Etnppl / 687071 RGDID:1590098 Length:499 Species:Rattus norvegicus


Alignment Length:460 Identity:104/460 - (22%)
Similarity:175/460 - (38%) Gaps:85/460 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 IQFFADYEKSI---GNYIYDVDGNILLDVYTQISSVPLGYNHPRLYKVFNNEQNLKTLINRPALG 120
            |.|.||..|.:   |.|::|..|...||....::.|  |:.||.:.|....:..|....:|    
  Rat    24 IFFAADPIKIMRARGQYMFDEKGERYLDCINNVAHV--GHCHPEVVKAAAKQMELLNTNSR---- 82

  Fly   121 VFPGKEWPEKLHSVLLNIA-------PKGLNKITTMMCGSCSNENAYKSIFIWYQNKLRGNAPLT 178
                     .||..::..|       |:.|:.......||.:|:.|.:     ...:.||:.   
  Rat    83 ---------FLHDNIIEFAKRLTATLPQTLSVCYFTNSGSEANDLALR-----LARQFRGHQ--- 130

  Fly   179 EQEKNSCMINIPPGAPKLSILSFKGAFHGRTLGALSTTHSKYIHKLDVPSFDWPIASFPE-YRYP 242
                              .:::.:.|:||.....:..:..|:....||......:|..|: ||..
  Rat   131 ------------------DVITLEHAYHGHLSSLIEISPYKFQEGKDVKKESVHVAPAPDMYRGK 177

  Fly   243 LDENVAHNKKEDEKC--LSEVQDLIQQYASK-NPVAGIVVEPIQSEGGDNEASPEFFRSLQAICK 304
            ..|:     .||...  ..||:.:|::..|: ..:|..:.|.:||.||.......:|:.:....:
  Rat   178 YRED-----HEDPSTAYADEVKKIIEEAQSRGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEHVR 237

  Fly   305 KNGIALLIDEVQTGGGSTGK-FWAHEHFELESPPDVVTFSKKLQLGGYFHN----------DDFI 358
            :.|...:.||||.|.|..|| ||:.:....:..||:||..|.:   |..|.          .:..
  Rat   238 QAGGVFIADEVQVGFGRVGKHFWSFQMSGEDFVPDIVTMGKPM---GNGHPISCVVTTKEIAEAF 299

  Fly   359 PNEPYRIFNTWMGDPGKVLLLEEVVKVIQEEKLLANVDVAGKVLKNGLLSLEKEFPHILNSTRGR 423
            .:.....|||:.|:|....:...|:.||::|.|..|....||.|.. ||..:|....::...||.
  Rat   300 SSSGMEYFNTYGGNPVSCAVGLAVLDVIEKENLQGNAVRVGKHLIE-LLKEQKAKHPLIGDIRGI 363

  Fly   424 GTFLAVNCTN--------TKVRDQIIGALKLHGI--QTGGCGEISIRFRPALIFKEYHANIVLDR 478
            |.|:.::...        |.....:|..:|..||  ...|.....::.:|.:.|.:..|..::|.
  Rat   364 GLFIGIDLVKDHEERTPATAEAQHVIYEMKGKGILLSADGPHRNVLKIKPPMCFTKEDAKFLVDH 428

  Fly   479 FRKVL 483
            ...||
  Rat   429 LDDVL 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GabatNP_001163479.1 GabT 27..484 CDD:223238 104/460 (23%)
AAT_I 27..483 CDD:302748 102/458 (22%)
EtnpplXP_003749444.1 GabT 11..437 CDD:223238 104/460 (23%)
OAT_like 26..433 CDD:99735 101/456 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0160
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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