DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gabat and CG8745

DIOPT Version :9

Sequence 1:NP_001163479.1 Gene:Gabat / 40188 FlyBaseID:FBgn0036927 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_648665.1 Gene:CG8745 / 39530 FlyBaseID:FBgn0036381 Length:494 Species:Drosophila melanogaster


Alignment Length:507 Identity:111/507 - (21%)
Similarity:193/507 - (38%) Gaps:110/507 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 NVEPKEPVVKTKSIPGPKSIELKKQLDSVQATGTIQFFADYEKSI---GNYIYDVDGNILLDVYT 86
            |:...|.:.||      ::|:|:.|  .:.....:.:.:|..|.:   |.|::|.:|...||...
  Fly     9 NLVASEQLSKT------ETIKLRNQ--HIGQACQLFYRSDPLKIVRGQGQYMFDEEGTRYLDCIN 65

  Fly    87 QISSVPLGYNHPRLYKVFNNEQNLKTLINRPALGVFPGKEWPEKLHSVLLNIA-------PKGLN 144
            .::.|  |:.||.:.:....:....:..||             .||..|:..|       |:.|:
  Fly    66 NVAHV--GHCHPEVVRAGALQMATISTNNR-------------FLHDELVQCARTLTSKMPEPLS 115

  Fly   145 KITTMMCGSCSNENAYKSIFIWYQNKLRGNAPLTEQEKNSCMINIPPGAPKLSILSFKGAFHGRT 209
            ....:..||.:|:.|           ||.....|:::               .:::...|:||..
  Fly   116 VCFFVNSGSEANDLA-----------LRLARNFTKRQ---------------DVITLDHAYHGHL 154

  Fly   210 LGALSTTHSK-----------YIHKLDVPSFDWPIASFPEYRYP-LDENVAHNKKEDEKCLSEVQ 262
            ...:..:..|           |:|....|  |.....|.:..|| .|....:.:..:|.|.    
  Fly   155 QSVMEVSPYKFNQPGGEAKPDYVHVAPCP--DVYGGKFTDKMYPDADMGALYAQPIEEICQ---- 213

  Fly   263 DLIQQYASKNPVAGIVVEPIQSEGGDNEASPEFFRSLQAICKKNGIALLIDEVQTGGGSTGK-FW 326
               :|.|....||..:.|.:||.||.......:|:::....:..|...:.||||.|.|..|. :|
  Fly   214 ---KQLAKGQGVAAFIAESLQSCGGQILPPAGYFQAVYDAVRSAGGVCIADEVQVGFGRVGSHYW 275

  Fly   327 AHEHFELESP-PDVVTFSKKLQLGGYFHNDDFIPNEP----------YRIFNTWMGDPGKVLLLE 380
            |   ||.::. ||:|..:|.:   |..|....:...|          ...|||:.|:|....:..
  Fly   276 A---FETQNVIPDIVCVAKPM---GNGHPVGAVVTTPEIAQAFHATGVAYFNTYGGNPVSCAIAN 334

  Fly   381 EVVKVIQEEKLLANVDVAGKVLKNGLLSLEKEFPHILNSTRGRGTFLAVNCT--------NTKVR 437
            .|::||:||.|.....|.|..|......|::|| ..:...||.|.|:.:...        :.|..
  Fly   335 AVMRVIEEEGLQQKALVLGDYLLEECNRLKQEF-ECIGDVRGAGLFVGIELVQDRKERIPDKKAA 398

  Fly   438 DQIIGALK-LHG--IQTGGCGEISIRFRPALIFKEYHANIVLDRFRKVLQGI 486
            ..::..:| ||.  :.:.|..:..|:.:|.:.|...:|:..|..||:.|..:
  Fly   399 HWVVNRMKQLHRVLVSSDGPNDNVIKLKPPMCFNRENADEFLLGFRECLTAV 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GabatNP_001163479.1 GabT 27..484 CDD:223238 109/501 (22%)
AAT_I 27..483 CDD:302748 109/500 (22%)
CG8745NP_648665.1 GabT 20..450 CDD:223238 107/488 (22%)
OAT_like 37..447 CDD:99735 103/466 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439933
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0160
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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