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Protein Alignment Gabat and Abat

DIOPT Version :9

Sequence 1:	NP_001163479.1	Gene:	Gabat / 40188	FlyBaseID:	FBgn0036927	Length:	486	Species:	Drosophila melanogaster
Sequence 2:	NP_766549.2	Gene:	Abat / 268860	MGIID:	2443582	Length:	500	Species:	Mus musculus

Alignment Length:	454	Identity:	248/454 - (54%)
Similarity:	339/454 - (74%)	Gaps:	2/454 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly    31 PVVKTKSIPGPKSIELKKQLDSVQATGTIQFFADYEKSIGNYIYDVDGNILLDVYTQISSVPLGY 95
            |::||: :|||:|.||.|||:::|....:.||.:||:|.|||:.|||||.:||:|:||||||:||
Mouse    44 PLMKTE-VPGPRSKELMKQLNTIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQISSVPIGY 107

  Fly    96 NHPRLYKVFNNEQNLKTLINRPALGVFPGKEWPEKLHSVLLNIAPKGLNKITTMMCGSCSNENAY 160
            |||.|.|:....||..|.|||||||:.|.:.:.:||...|:::||:|::::.||.|||||||||:
Mouse   108 NHPALAKLVQQPQNASTFINRPALGILPPENFVDKLQESLMSVAPRGMSQLITMACGSCSNENAF 172

  Fly   161 KSIFIWYQNKLRGNAPLTEQEKNSCMINIPPGAPKLSILSFKGAFHGRTLGALSTTHSKYIHKLD 225
            |:||:||::|.||....:::|..:||:|..||.|..|||||.|||||||:|.|:|||||.|||:|
Mouse   173 KTIFMWYRSKERGQRGFSKEELETCMVNQSPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKID 237

  Fly   226 VPSFDWPIASFPEYRYPLDENVAHNKKEDEKCLSEVQDLIQQY-ASKNPVAGIVVEPIQSEGGDN 289
            :||||||||.||..:|||:|....|::|:.:||.||:|||.:| ..|..||||:|||||||||||
Mouse   238 IPSFDWPIAPFPRLKYPLEEFTTDNQQEEARCLEEVEDLIVKYRKKKRTVAGIIVEPIQSEGGDN 302

  Fly   290 EASPEFFRSLQAICKKNGIALLIDEVQTGGGSTGKFWAHEHFELESPPDVVTFSKKLQLGGYFHN 354
            .||.:|||.|:.|.:|:|.|.|:||||||||.|||||||||:.|:.|.||:|||||:..||:||.
Mouse   303 HASDDFFRKLRDIARKHGCAFLVDEVQTGGGCTGKFWAHEHWGLDDPADVMTFSKKMMTGGFFHK 367

  Fly   355 DDFIPNEPYRIFNTWMGDPGKVLLLEEVVKVIQEEKLLANVDVAGKVLKNGLLSLEKEFPHILNS 419
            ::|.|:.||||||||:|||.|.|||.||:.:|:.|.||.||...||.|..|||.|:.::|..::.
Mouse   368 EEFRPSAPYRIFNTWLGDPSKNLLLAEVINIIKREDLLNNVARVGKTLLTGLLDLQAQYPQFISR 432

  Fly   420 TRGRGTFLAVNCTNTKVRDQIIGALKLHGIQTGGCGEISIRFRPALIFKEYHANIVLDRFRKVL 483
            .||||||.:.:..:..:|:::|...:..|:..||||:.||||||.|:|:::||::.|..|..:|
Mouse   433 VRGRGTFCSFDTPDEAIRNKLILIARNKGVVLGGCGDKSIRFRPTLVFRDHHAHLFLSIFSGIL 496

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.