DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gabat and ABAT

DIOPT Version :9

Sequence 1:NP_001163479.1 Gene:Gabat / 40188 FlyBaseID:FBgn0036927 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001373544.1 Gene:ABAT / 18 HGNCID:23 Length:532 Species:Homo sapiens


Alignment Length:486 Identity:251/486 - (51%)
Similarity:337/486 - (69%) Gaps:34/486 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PVVKTKSIPGPKSIELKKQLDSVQATGTIQFFADYEKSIGNYIYDVDGNILLDVYTQISSVPL-- 93
            |::||: :|||:|.||.|||:.:|....:.||.:||:|.|||:.|||||.:||:|:||||||:  
Human    44 PLMKTE-VPGPRSQELMKQLNIIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQISSVPIEM 107

  Fly    94 ------------------------------GYNHPRLYKVFNNEQNLKTLINRPALGVFPGKEWP 128
                                          ||:||.|.|:....||....:||||||:.|.:.:.
Human   108 VVSLCAAQAGLELLDSSDPPTLASQSARISGYSHPALLKLIQQPQNASMFVNRPALGILPPENFV 172

  Fly   129 EKLHSVLLNIAPKGLNKITTMMCGSCSNENAYKSIFIWYQNKLRGNAPLTEQEKNSCMINIPPGA 193
            |||...||::||||::::.||.|||||||||.|:||:||::|.||....:::|..:||||..||.
Human   173 EKLRQSLLSVAPKGMSQLITMACGSCSNENALKTIFMWYRSKERGQRGFSQEELETCMINQAPGC 237

  Fly   194 PKLSILSFKGAFHGRTLGALSTTHSKYIHKLDVPSFDWPIASFPEYRYPLDENVAHNKKEDEKCL 258
            |..|||||.|||||||:|.|:|||||.|||:|:||||||||.||..:|||:|.|..|::|:.:||
Human   238 PDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCL 302

  Fly   259 SEVQDLIQQY-ASKNPVAGIVVEPIQSEGGDNEASPEFFRSLQAICKKNGIALLIDEVQTGGGST 322
            .||:|||.:| ..|..||||:|||||||||||.||.:|||.|:.|.:|:|.|.|:||||||||.|
Human   303 EEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDIARKHGCAFLVDEVQTGGGCT 367

  Fly   323 GKFWAHEHFELESPPDVVTFSKKLQLGGYFHNDDFIPNEPYRIFNTWMGDPGKVLLLEEVVKVIQ 387
            ||||||||:.|:.|.||:|||||:..||:||.::|.||.||||||||:|||.|.|||.||:.:|:
Human   368 GKFWAHEHWGLDDPADVMTFSKKMMTGGFFHKEEFRPNAPYRIFNTWLGDPSKNLLLAEVINIIK 432

  Fly   388 EEKLLANVDVAGKVLKNGLLSLEKEFPHILNSTRGRGTFLAVNCTNTKVRDQIIGALKLHGIQTG 452
            .|.||.|...|||.|..|||.|:..:|..::..||||||.:.:..:..:|:::|...:..|:..|
Human   433 REDLLNNAAHAGKALLTGLLDLQARYPQFISRVRGRGTFCSFDTPDDSIRNKLILIARNKGVVLG 497

  Fly   453 GCGEISIRFRPALIFKEYHANIVLDRFRKVL 483
            |||:.||||||.|:|:::||::.|:.|..:|
Human   498 GCGDKSIRFRPTLVFRDHHAHLFLNIFSDIL 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GabatNP_001163479.1 GabT 27..484 CDD:223238 251/486 (52%)
AAT_I 27..483 CDD:302748 250/484 (52%)
ABATNP_001373544.1 GABAtrns_euk 34..528 CDD:129782 250/484 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165143328
Domainoid 1 1.000 516 1.000 Domainoid score I309
eggNOG 1 0.900 - - E1_COG0160
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H542
Inparanoid 1 1.050 539 1.000 Inparanoid score I1194
Isobase 1 0.950 - 0 Normalized mean entropy S672
OMA 1 1.010 - - QHG55983
OrthoDB 1 1.010 - - D222188at33208
OrthoFinder 1 1.000 - - FOG0005369
OrthoInspector 1 1.000 - - oto88582
orthoMCL 1 0.900 - - OOG6_103520
Panther 1 1.100 - - LDO PTHR43206
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R468
SonicParanoid 1 1.000 - - X3808
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1716.750

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