DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gabat and T09B4.8

DIOPT Version :9

Sequence 1:NP_001163479.1 Gene:Gabat / 40188 FlyBaseID:FBgn0036927 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_491777.3 Gene:T09B4.8 / 172301 WormBaseID:WBGene00020382 Length:444 Species:Caenorhabditis elegans


Alignment Length:501 Identity:110/501 - (21%)
Similarity:192/501 - (38%) Gaps:126/501 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 LDSVQA------TGTIQFFAD---YEKSIGNYIYDVDGNILLDVYTQISSVPLGYNHPRLYKVFN 105
            :..|||      .|.:.::.|   ..|....:::|.:|...||.:..|.:|.:|:.||::.... 
 Worm     1 MQRVQALRPLLPKGHVTYYKDQLLITKGEKQFLFDSNGKKYLDFFGGIVTVSVGHCHPKINAAL- 64

  Fly   106 NEQNLKTLINRPALGVFPGKEWPEKLHSVLLNIAPKGLNKITTMMCGSCSNENAYKSIFIWYQNK 170
            .||..|...........|..|:.||    ||:..|..||.:..:..||.:|:.|.         .
 Worm    65 TEQAQKLWHTTSIYHTEPIYEYAEK----LLSKFPSKLNSVFFVNSGSEANDLAL---------A 116

  Fly   171 LRGNAPLTEQEKNSCMINIPPGAPKLSILSFKGAFHGRTLGALSTTHSKYIHKLDVPSFDW-PIA 234
            |..|.                 ..:..::|.:..:||.|...|..|:..          :| |: 
 Worm   117 LARNY-----------------TGRFDVISMRNGYHGMTQTVLGATNLG----------NWKPV- 153

  Fly   235 SFPE------------YR----------YPLDENVAHNKKED---------EKCLSEVQD-LIQQ 267
             ||.            ||          .|:.   ..|:|.|         :|.:.:..| |:..
 Worm   154 -FPHGFNIFKSLNADPYRGIFGGSNCRDSPIQ---VKNRKCDCKPGSCQASDKYIEQFDDMLLHD 214

  Fly   268 YASKNPVAGIVVEPIQSEGGDNEASPEFF-RSLQAICKKNGIALLIDEVQTGGGSTGK-FWAHEH 330
            ::..:..|..::|.||..||..:....:. :|.:::.|:.|:| :.||||||.|..|. ||..| 
 Worm   215 FSHSSGPAAFLIESIQGVGGTVQYPHGYLKKSYESVQKRGGLA-IADEVQTGFGRLGSHFWGFE- 277

  Fly   331 FELESPPDVVTFSKKL----QLGGYFHNDDFIPN-EPYRIFNTWMGDPGKVLLLEEVVKVIQEEK 390
             ..::.||:||.:|.:    .||....:.:...: .....|||:.|:|...::.:.|::||:|||
 Worm   278 -SQDALPDMVTMAKGIGNGFPLGAVVTSKEIADSFNKSLYFNTYGGNPLASVVGKAVLEVIEEEK 341

  Fly   391 LLANVDVAGKVLKNGLLSLEKEFPHILNSTRGRGTFLAVNC-----------------TNTKVRD 438
            |..|..|.|......|.:::..   .:...||:|..:.|..                 .:||.:.
 Worm   342 LQENSAVVGDYFLKQLAAIDDA---TIGDVRGKGLMIGVELIDEQGKPLAAAKTAAIFEDTKNQG 403

  Fly   439 QIIGALKLHGIQTGGCGEISIRFRPALIFKEYHANIVLDRFRKVLQ 484
            .:||...:||        ..:|.:|.:...:...:..:|...|.::
 Worm   404 LLIGKGGIHG--------NVLRIKPPMCITKKDVDFAVDIIAKSIK 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GabatNP_001163479.1 GabT 27..484 CDD:223238 110/499 (22%)
AAT_I 27..483 CDD:302748 110/498 (22%)
T09B4.8NP_491777.3 GabT 1..442 CDD:223238 110/501 (22%)
OAT_like 14..440 CDD:99735 107/485 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0160
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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