DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7646 and ncs-3

DIOPT Version :9

Sequence 1:NP_001287124.1 Gene:CG7646 / 40187 FlyBaseID:FBgn0036926 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_508201.2 Gene:ncs-3 / 186953 WormBaseID:WBGene00003565 Length:199 Species:Caenorhabditis elegans


Alignment Length:186 Identity:78/186 - (41%)
Similarity:112/186 - (60%) Gaps:9/186 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGCLSSK--------DRLTKEDMEFLKTHTRYDEATIKEWYKGFKQDCPNGRLTPAKFVDMYKMF 57
            ||...||        .:||.|:::.|:..|.:.:..:|:|||.|.:|||:|.|...:|..:||.|
 Worm     1 MGKSQSKVQTKKKANKKLTTEEVQTLEQVTYFTKKELKKWYKDFVRDCPSGELKMEEFQGIYKQF 65

  Fly    58 FPSGNAEEFCDHVFRTFDMDKNGYIDFKEFLLAIDVTSSGTPEEKLKWAFRMYDVDGNGVIDIQE 122
            ||:|:..:|...||..||.:.:|:|.|.||:.|:.:||.||.:|||.|||.:||||.:|.|...|
 Worm    66 FPNGDPSKFAAFVFNVFDDNHDGHISFSEFIAALSITSRGTLDEKLDWAFSLYDVDKDGFITKDE 130

  Fly   123 MTKIVQAIYDMLG-ACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEFLKGCLQD 177
            |..||.|||.|:| .....:..|:.::|.:.||..||.|.|||||::||.:|...|
 Worm   131 MADIVDAIYSMIGNMLELPKDEDTPQKRVEKIFTNMDRNLDGQLTREEFKEGSKAD 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7646NP_001287124.1 FRQ1 18..178 CDD:227455 71/161 (44%)
ncs-3NP_508201.2 FRQ1 19..187 CDD:227455 73/168 (43%)
EFh 77..135 CDD:238008 28/57 (49%)
EFh 110..182 CDD:238008 34/71 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0044
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1369072at2759
OrthoFinder 1 1.000 - - FOG0000038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

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