DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7646 and ncs-1

DIOPT Version :10

Sequence 1:NP_649167.1 Gene:CG7646 / 40187 FlyBaseID:FBgn0036926 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_508186.1 Gene:ncs-1 / 180448 WormBaseID:WBGene00003563 Length:191 Species:Caenorhabditis elegans


Alignment Length:187 Identity:83/187 - (44%)
Similarity:114/187 - (60%) Gaps:5/187 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGCLSSKDRLTKEDMEFLKTHTRYDEATIKEWYKGFKQDCPNGRLTPAKFVDMYKMFFPSGNAEE 65
            ||..:||  |....:..|...|.:.|..||:|||||.:|||||.||.|.|..:||.|||.|:..:
 Worm     1 MGKGNSK--LKSSQIRDLAEQTYFTEKEIKQWYKGFVRDCPNGMLTEAGFQKIYKQFFPQGDPSD 63

  Fly    66 FCDHVFRTFDMDKNGYIDFKEFLLAIDVTSSGTPEEKLKWAFRMYDVDGNGVIDIQEMTKIVQAI 130
            |...||:.||.:|:|.|:|.||:.|:.:||.|..:|||.|||::||:|.:|.|...||..||.:|
 Worm    64 FASFVFKVFDENKDGAIEFHEFIRALSITSRGNLDEKLHWAFKLYDLDQDGFITRNEMLSIVDSI 128

  Fly   131 YDMLGACSSNRPAD--SAEERAKNIFAKMDENNDGQLTQDEFLKGCLQDEELSKMLA 185
            |.|:|: |...|.:  :.|:|...||..||:|||.|||.:||.:|...|..:...|:
 Worm   129 YKMVGS-SVQLPEEENTPEKRVDRIFRMMDKNNDAQLTLEEFKEGAKADPSIVHALS 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7646NP_649167.1 FRQ1 42..176 CDD:444056 63/135 (47%)
ncs-1NP_508186.1 EFh 67..125 CDD:238008 27/57 (47%)
EFh 100..174 CDD:238008 35/74 (47%)

Return to query results.
Submit another query.