DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7646 and ncs-2

DIOPT Version :10

Sequence 1:NP_649167.1 Gene:CG7646 / 40187 FlyBaseID:FBgn0036926 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001366858.1 Gene:ncs-2 / 172866 WormBaseID:WBGene00003564 Length:190 Species:Caenorhabditis elegans


Alignment Length:184 Identity:117/184 - (63%)
Similarity:144/184 - (78%) Gaps:0/184 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGCLSSKDRLTKEDMEFLKTHTRYDEATIKEWYKGFKQDCPNGRLTPAKFVDMYKMFFPSGNAEE 65
            ||...||.:|:|||:||||.:|.:.|..||||||||.||||.|.||..:|:.:||.|||||:||.
 Worm     1 MGIKGSKPKLSKEDLEFLKKNTNFTEEQIKEWYKGFVQDCPKGHLTKEQFIKVYKDFFPSGSAEG 65

  Fly    66 FCDHVFRTFDMDKNGYIDFKEFLLAIDVTSSGTPEEKLKWAFRMYDVDGNGVIDIQEMTKIVQAI 130
            ||:|||||||.|.:|:||||||||||:||||||||:||:|||||||:||||.||.:||.||::||
 Worm    66 FCEHVFRTFDTDNSGFIDFKEFLLAINVTSSGTPEQKLEWAFRMYDIDGNGTIDEKEMIKIIEAI 130

  Fly   131 YDMLGACSSNRPADSAEERAKNIFAKMDENNDGQLTQDEFLKGCLQDEELSKML 184
            |:|||...:....||..:|||.||.|||.|||.:||..||:.|||.|:||.::|
 Worm   131 YEMLGPEVTKSADDSPRKRAKMIFEKMDVNNDKELTLKEFVDGCLADKELFQIL 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7646NP_649167.1 FRQ1 42..176 CDD:444056 86/133 (65%)
ncs-2NP_001366858.1 FRQ1 24..173 CDD:444056 97/148 (66%)
EFh 67..127 CDD:238008 46/59 (78%)

Return to query results.
Submit another query.