DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nca and CBL6

DIOPT Version :9

Sequence 1:NP_788543.1 Gene:Nca / 40186 FlyBaseID:FBgn0013303 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_001328805.1 Gene:CBL6 / 827330 AraportID:AT4G16350 Length:226 Species:Arabidopsis thaliana


Alignment Length:180 Identity:57/180 - (31%)
Similarity:89/180 - (49%) Gaps:14/180 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KQNSKLKPEVLEDLKQNTEFTDAEIQEWYKGFLKDCPSGHLSVEEFKKIYGNFFPYGDASKFAEH 67
            :||.|       |:.:.|.||..||:..|:.|.....:|.:..|:|:.:.  |......|.||:.
plant    28 RQNPK-------DVARGTVFTVNEIEALYELFKSISKNGLIDKEQFQLVL--FKMNTTRSLFADR 83

  Fly    68 VFRTFDANGDGTIDFREFLCALSV-TSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAIYKM 131
            ||..||....|.:||..|..:||| ....|.|.|::::|.:|||:..|||.|||:.::|  :..:
plant    84 VFDLFDTKNTGILDFEAFARSLSVFHPNAKFEDKIEFSFKLYDLNQQGYIKRQEVKQMV--VRTL 146

  Fly   132 VGSVMKMPEDESTPEKRTDKIFRQMDRNKDGKLSLEEFIEGAKSDPSIVR 181
            ..|.|.:  .:...|...||.|.:.|...|||:..||:.......||:::
plant   147 AESGMNL--SDHVIESIIDKTFEEADTKLDGKIDKEEWRSLVLRHPSLLQ 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NcaNP_788543.1 FRQ1 13..179 CDD:227455 53/166 (32%)
CBL6NP_001328805.1 FRQ1 38..192 CDD:227455 52/159 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 86 1.000 Inparanoid score I2330
OMA 1 1.010 - - QHG53747
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1040
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.970

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