DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nca and Kcnip4

DIOPT Version :9

Sequence 1:NP_788543.1 Gene:Nca / 40186 FlyBaseID:FBgn0013303 Length:190 Species:Drosophila melanogaster
Sequence 2:XP_030110777.1 Gene:Kcnip4 / 80334 MGIID:1933131 Length:256 Species:Mus musculus


Alignment Length:170 Identity:63/170 - (37%)
Similarity:108/170 - (63%) Gaps:2/170 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KPEVLEDLKQNTEFTDAEIQEWYKGFLKDCPSGHLSVEEFKKIYGNFFPYGDASKFAEHVFRTFD 73
            :||.||.|:..::||..|:|..|:||..:||||.::.|.||:||..|||.||::.:|..:|..||
Mouse    69 RPEALELLEAQSKFTKKELQILYRGFKNECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFD 133

  Fly    74 ANGDGTIDFREFLCALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAIYKMVGSVMKM 138
            .:.:|.:.|.:|:..||:..||.:::||.|||::||::.:|||:::|||:|:.|||.|:|.....
Mouse   134 TDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYP 198

  Fly   139 PEDESTPEKRTDKIFR--QMDRNKDGKLSLEEFIEGAKSD 176
            ...|..|.:..:..|:  ..:.:::|.|.::..:.|..:|
Mouse   199 VLKEDAPRQHVETFFQVGMNNASREGWLEVDCLMPGKHTD 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NcaNP_788543.1 FRQ1 13..179 CDD:227455 61/166 (37%)
Kcnip4XP_030110777.1 FRQ1 80..>186 CDD:227455 46/105 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0044
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.810

Return to query results.
Submit another query.