DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nca and hpcal4

DIOPT Version :10

Sequence 1:NP_788543.1 Gene:Nca / 40186 FlyBaseID:FBgn0013303 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_001072798.1 Gene:hpcal4 / 780259 XenbaseID:XB-GENE-995790 Length:191 Species:Xenopus tropicalis


Alignment Length:190 Identity:131/190 - (68%)
Similarity:161/190 - (84%) Gaps:2/190 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKQNSKLKPEVLEDLKQNTEFTDAEIQEWYKGFLKDCPSGHLSVEEFKKIYGNFFPYGDASKFA 65
            |||.||||.||:|:||.|:|||::.|::.||||||||||||.|:::||:::|..|||||||||||
 Frog     1 MGKPNSKLAPEMLQDLVQSTEFSEQELKHWYKGFLKDCPSGILNLQEFQQLYIKFFPYGDASKFA 65

  Fly    66 EHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAIYK 130
            :|.|||||.|||||||||||:|||||||||..||||.|||.||||||:|.|:|.|||||:.||||
 Frog    66 QHAFRTFDKNGDGTIDFREFICALSVTSRGSFEQKLNWAFEMYDLDGDGKITRLEMLEIIEAIYK 130

  Fly   131 MVGSV--MKMPEDESTPEKRTDKIFRQMDRNKDGKLSLEEFIEGAKSDPSIVRLLQCDPQ 188
            |||:|  |:|.:|..||::|.||||.:||:::|.:::||||.|.||||||||.|||||.|
 Frog   131 MVGTVIMMRMNQDGLTPQQRVDKIFAKMDKDRDDQITLEEFKEAAKSDPSIVLLLQCDMQ 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NcaNP_788543.1 FRQ1 21..175 CDD:444056 104/155 (67%)
hpcal4NP_001072798.1 FRQ1 21..177 CDD:444056 104/155 (67%)

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