DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nca and Ncald

DIOPT Version :10

Sequence 1:NP_788543.1 Gene:Nca / 40186 FlyBaseID:FBgn0013303 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_001019542.1 Gene:Ncald / 553106 RGDID:1560287 Length:193 Species:Rattus norvegicus


Alignment Length:189 Identity:167/189 - (88%)
Similarity:180/189 - (95%) Gaps:0/189 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKQNSKLKPEVLEDLKQNTEFTDAEIQEWYKGFLKDCPSGHLSVEEFKKIYGNFFPYGDASKFA 65
            ||||||||:|||::||.::|:||:.||||||||||:||||||||:||||||||||||||||||||
  Rat     1 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFA 65

  Fly    66 EHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAIYK 130
            ||||||||||||||||||||:.||||||||||||||||||||||||||||||:.||||||.||||
  Rat    66 EHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYK 130

  Fly   131 MVGSVMKMPEDESTPEKRTDKIFRQMDRNKDGKLSLEEFIEGAKSDPSIVRLLQCDPQS 189
            ||.||||||||||||||||:|||||||.|:||||||||||.||||||||||||||||.|
  Rat   131 MVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVRLLQCDPSS 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NcaNP_788543.1 FRQ1 21..175 CDD:444056 138/153 (90%)
NcaldNP_001019542.1 FRQ1 21..175 CDD:444056 138/153 (90%)

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