DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nca and LOC500007

DIOPT Version :9

Sequence 1:NP_788543.1 Gene:Nca / 40186 FlyBaseID:FBgn0013303 Length:190 Species:Drosophila melanogaster
Sequence 2:XP_006236139.1 Gene:LOC500007 / 500007 RGDID:1588445 Length:217 Species:Rattus norvegicus


Alignment Length:158 Identity:46/158 - (29%)
Similarity:80/158 - (50%) Gaps:17/158 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 IQEWYKGFLKDCPSG-----HLSVEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFL 86
            ||.:|.  |..||.|     .|....|:.:..|||...: ......||..||.:||..::.:|::
  Rat    29 IQLFYS--LAGCPIGKVDNTKLDCNAFRGVLQNFFGMTN-DVLMNRVFFVFDKDGDSHVNLQEWI 90

  Fly    87 CALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAIYKMVGSVMKMPEDESTPEKRTDK 151
            ..|:|..||..|:|:::.|.:|.|.|:.||||:::.:::.:      |:.....:|...|...|.
  Rat    91 KGLAVFLRGTFEEKMRFCFEVYYLSGDAYISREKIFDMLKS------SLFHNSPEEENEEGIKDL 149

  Fly   152 I---FRQMDRNKDGKLSLEEFIEGAKSD 176
            :   .::||.:.|||:|.|:|.:..:.|
  Rat   150 VEISLKKMDYDNDGKISFEDFEKAVRKD 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NcaNP_788543.1 FRQ1 13..179 CDD:227455 46/158 (29%)
LOC500007XP_006236139.1 EFh 104..175 CDD:298682 21/76 (28%)
EF-hand_7 105..174 CDD:290234 20/74 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0044
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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