DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nca and guca1g

DIOPT Version :10

Sequence 1:NP_788543.1 Gene:Nca / 40186 FlyBaseID:FBgn0013303 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_001011660.1 Gene:guca1g / 494572 ZFINID:ZDB-GENE-050120-1 Length:187 Species:Danio rerio


Alignment Length:186 Identity:71/186 - (38%)
Similarity:111/186 - (59%) Gaps:14/186 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKQNSKLKPEVLEDLKQNTEFTDAEIQEWYKGFLKDCPSGHLSVEEFKKIYGNFFPYGDASKFA 65
            ||:..|       ::.::..|.|  |||..|..|:|.||||.|.:.||::|:|......:.:.:.
Zfish     1 MGQNQS-------DEEEEEVELT--EIQPLYTRFMKVCPSGALHLHEFRRIFGVQSSSEEEALYM 56

  Fly    66 EHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAIYK 130
            |.:|::||.|.|..|||.||:.|:.:..||.||.:|||:|.:||.|.||.:.|||::.::..:.|
Zfish    57 ETIFKSFDTNRDNVIDFMEFVAAVHLVLRGNLEDRLKWSFKVYDRDENGKLDRQEVIHVIRILCK 121

  Fly   131 MVGSVMKMPEDESTPEKRTDKIFRQMDRNKDGKLSLEEFIEGAKSDPSIVRLLQCD 186
            :..:.:.|     ||.:..|:||..:|.|.||::||.||:|||:.|..|:.||:.|
Zfish   122 LKKNRINM-----TPVEICDRIFELLDENNDGQISLSEFLEGAEKDAWIMDLLKLD 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NcaNP_788543.1 FRQ1 21..175 CDD:444056 63/153 (41%)
guca1gNP_001011660.1 FRQ1 44..161 CDD:444056 47/121 (39%)

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