DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nca and kcnip1b

DIOPT Version :10

Sequence 1:NP_788543.1 Gene:Nca / 40186 FlyBaseID:FBgn0013303 Length:190 Species:Drosophila melanogaster
Sequence 2:XP_021334841.1 Gene:kcnip1b / 494089 ZFINID:ZDB-GENE-041212-57 Length:225 Species:Danio rerio


Alignment Length:176 Identity:73/176 - (41%)
Similarity:112/176 - (63%) Gaps:0/176 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KPEVLEDLKQNTEFTDAEIQEWYKGFLKDCPSGHLSVEEFKKIYGNFFPYGDASKFAEHVFRTFD 73
            :||.||.|:..|.|:..|:|..|:||..:||||.::.:.||.||..|||:||||.:|.::|..||
Zfish    44 RPEGLEQLEAQTNFSKQELQVLYRGFKNECPSGVVNEDTFKHIYAQFFPHGDASTYAHYLFHAFD 108

  Fly    74 ANGDGTIDFREFLCALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAIYKMVGSVMKM 138
            ...:|:|.|.:|:..||...||.:..||:|.|.:||::.:|:|:::||.|||.|||.|:|.....
Zfish   109 TRNNGSIKFEDFVMGLSTLLRGTVRDKLEWTFHLYDINKDGFINKEEMTEIVRAIYDMMGKYTYP 173

  Fly   139 PEDESTPEKRTDKIFRQMDRNKDGKLSLEEFIEGAKSDPSIVRLLQ 184
            ......|:...|..|.:||:||||.::||||:...:.|.:::|.:|
Zfish   174 ALKGDVPKAHVDAFFEKMDKNKDGVVTLEEFVLACQEDENMMRSMQ 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NcaNP_788543.1 FRQ1 21..175 CDD:444056 64/153 (42%)
kcnip1bXP_021334841.1 FRQ1 <99..210 CDD:444056 43/110 (39%)

Return to query results.
Submit another query.