DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nca and ppp3r1b

DIOPT Version :10

Sequence 1:NP_788543.1 Gene:Nca / 40186 FlyBaseID:FBgn0013303 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_001004553.1 Gene:ppp3r1b / 447814 ZFINID:ZDB-GENE-040912-18 Length:170 Species:Danio rerio


Alignment Length:157 Identity:56/157 - (35%)
Similarity:88/157 - (56%) Gaps:15/157 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LKQNTEFTDAEIQEWYKGFLK-DCP-SGHLSVEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDG 78
            |:..:.|...||:...|.|.| |.. ||.||||||..:     |....:...:.|...||.:|:|
Zfish     9 LEMCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSL-----PELQQNPLVQRVIDIFDTDGNG 68

  Fly    79 TIDFREFLCALSVTS-RGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAIYKMVGSVMKMPEDE 142
            .:||:||:..:|..| :|..||||::||.:||:|.:||||..|:.::   :..|||:.:|    :
Zfish    69 EVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQV---LKMMVGNNLK----D 126

  Fly   143 STPEKRTDKIFRQMDRNKDGKLSLEEF 169
            :..::..||.....|::.||::|.|||
Zfish   127 TQLQQIVDKTIINADKDGDGRISFEEF 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NcaNP_788543.1 FRQ1 21..175 CDD:444056 55/152 (36%)
ppp3r1bNP_001004553.1 FRQ1 20..157 CDD:444056 53/146 (36%)

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