Protein Alignment Nca and d-cup

DIOPT Version :10

• Sequence 1: NP_788543.1
• Gene: Nca / 40186
• FlyBaseID: FBgn0013303
• Length: 190
• Species: Drosophila melanogaster
• Sequence 2: NP_650235.1
• Gene: d-cup / 41580
• FlyBaseID: FBgn0038089
• Length: 219
• Species: Drosophila melanogaster
• Alignment Length: 170
• Identity: 42/170 - (24%)
• Similarity: 77/170 - (45%)
• Gaps: 19/170 - (11%)

  Fly    22 FTDAEI----QEWYKGFLKDCPSG-HLSVEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTID 81
            |.|:|:    ..:||..|::.||. .::..:|..|...|....|.......|  |..|.|...:.
  Fly    32 FNDSEVTCILMIYYKYSLQNGPSARRITSSQFVNIVIGFQQLYDMDVVDRIV--TLIAGGRKHVT 94

  Fly    82 FREFLCALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAIYKMVGSVMKMPEDESTPE 146
            ..||:..:::.....:|:|:::|:.:||.:|.| |:|:.:...|...:  ||      :|:...|
  Fly    95 PMEFVNYMTILMSRDMERKMEFAYMVYDKNGMG-INREIISSSVERFF--VG------DDDEVLE 150

  Fly   147 KRTDKI---FRQMDRNKDGKLSLEEFIEGAKSDPSIVRLL 183
            .|.|.:   ..:.|.::||.:|.||:.......|.::..|
  Fly   151 MRLDMVDFLLLKFDEDQDGYISFEEYRSIVLQQPRLLEFL 190

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nca	NP_788543.1	FRQ1	21..175	CDD:444056	40/160 (25%)
d-cup	NP_650235.1	FRQ1	70..182	CDD:444056	30/122 (25%)