DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nca and hpca

DIOPT Version :10

Sequence 1:NP_788543.1 Gene:Nca / 40186 FlyBaseID:FBgn0013303 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_957017.1 Gene:hpca / 393696 ZFINID:ZDB-GENE-040426-1683 Length:193 Species:Danio rerio


Alignment Length:189 Identity:169/189 - (89%)
Similarity:179/189 - (94%) Gaps:0/189 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKQNSKLKPEVLEDLKQNTEFTDAEIQEWYKGFLKDCPSGHLSVEEFKKIYGNFFPYGDASKFA 65
            ||||||||:||:|:||::||||||.|:||||||||||||||||:||||||||.||||||||||||
Zfish     1 MGKQNSKLRPEMLQDLRENTEFTDHELQEWYKGFLKDCPSGHLNVEEFKKIYANFFPYGDASKFA 65

  Fly    66 EHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAIYK 130
            ||||||||.|.|||||||||:.|||||||||||||||||||||||||||||||:||||||.||||
Zfish    66 EHVFRTFDTNNDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISREEMLEIVQAIYK 130

  Fly   131 MVGSVMKMPEDESTPEKRTDKIFRQMDRNKDGKLSLEEFIEGAKSDPSIVRLLQCDPQS 189
            ||.||||||||||||||||||||||||.|.||||||||||:||||||||||||||||.|
Zfish   131 MVSSVMKMPEDESTPEKRTDKIFRQMDLNNDGKLSLEEFIKGAKSDPSIVRLLQCDPSS 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NcaNP_788543.1 FRQ1 21..175 CDD:444056 139/153 (91%)
hpcaNP_957017.1 FRQ1 21..175 CDD:444056 139/153 (91%)

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