DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nca and guca1ab.1

DIOPT Version :10

Sequence 1:NP_788543.1 Gene:Nca / 40186 FlyBaseID:FBgn0013303 Length:190 Species:Drosophila melanogaster
Sequence 2:XP_073792439.1 Gene:guca1ab.1 / 393629 ZFINID:ZDB-GENE-040426-1577 Length:226 Species:Danio rerio


Alignment Length:166 Identity:66/166 - (39%)
Similarity:103/166 - (62%) Gaps:9/166 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 TEFTDAEIQEWYKGFLKDCPSGHLSVEEFKKIYG--NFFPYGDASKFAEHVFRTFDANGDGTIDF 82
            ||.:..:..:||:.|:.:||||.|:..||||.:|  |.....:|  :...:|:|||.:.||.|||
Zfish    38 TELSACKCHQWYRKFMTECPSGQLTFYEFKKFFGLKNLSEKSNA--YVNTMFKTFDIDDDGCIDF 100

  Fly    83 REFLCALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAIYKMVGSVMKMPEDESTPEK 147
            .|::.|||:..:|.::|||:|.|.::|:||:|.|.:.|:|.|..|:..:.|:     |.|.:.|.
Zfish   101 MEYVAALSLVLKGGVQQKLRWYFKLFDMDGSGCIDKDELLLIFKAVQAINGA-----EPEISAED 160

  Fly   148 RTDKIFRQMDRNKDGKLSLEEFIEGAKSDPSIVRLL 183
            ..|.:|.::|.|.||:||||||:||..:|..|..:|
Zfish   161 LADMVFNKIDVNGDGELSLEEFMEGISADEKISEML 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NcaNP_788543.1 FRQ1 21..175 CDD:444056 62/155 (40%)
guca1ab.1XP_073792439.1 None

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