DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nca and CG3565

DIOPT Version :10

Sequence 1:NP_788543.1 Gene:Nca / 40186 FlyBaseID:FBgn0013303 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_611942.1 Gene:CG3565 / 37933 FlyBaseID:FBgn0035034 Length:244 Species:Drosophila melanogaster


Alignment Length:201 Identity:40/201 - (19%)
Similarity:89/201 - (44%) Gaps:29/201 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QNSKLKPEVLED---LKQNTEFTDAE----IQEWYKGFLKDCP-SGHLSVEEFKKIYGNFFPYGD 60
            :|::.....::|   |.:::.|:..|    :..::|..|.:.| :.::::::...:....|...|
  Fly    12 ENARFNYVYMKDIARLAKDSIFSHNELISIVMLYHKFVLVNGPRAKYMTIQQLSALMELLFEIVD 76

  Fly    61 ASKFAEHVFRTFDANGDGTIDF--------REFLCALSVTSRGKLEQKLKWAFSMYDLDGNGYIS 117
            ....|..|:|.....|....||        ..|:...:|.....|:.|:::|||:||...:..::
  Fly    77 RDLIATIVYRIAHTPGSRPPDFFSDKHIHLESFVRLFTVYFTKDLQLKMEFAFSVYDKSDSKQLN 141

  Fly   118 RQEMLEIVTAIYKMVGSVMKMPEDESTPEKRTD---KIFRQMDRNKDGKLSLEEFIEGAKSDPSI 179
            .::       :...||...:..:::.:.|.|.|   .:|.:.|.:||..:.::|:.|..:..|  
  Fly   142 GEQ-------VGFFVGKFFESEDEDESIELRLDMKEMLFLKFDLDKDTNIGVDEYYEVVRRQP-- 197

  Fly   180 VRLLQC 185
             .||:|
  Fly   198 -MLLEC 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NcaNP_788543.1 FRQ1 21..175 CDD:444056 33/169 (20%)
CG3565NP_611942.1 None

Return to query results.
Submit another query.