DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nca and guca1c

DIOPT Version :9

Sequence 1:NP_788543.1 Gene:Nca / 40186 FlyBaseID:FBgn0013303 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_919374.1 Gene:guca1c / 373099 ZFINID:ZDB-GENE-030829-1 Length:188 Species:Danio rerio


Alignment Length:183 Identity:68/183 - (37%)
Similarity:100/183 - (54%) Gaps:17/183 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKQNSKLKPEVLEDLKQNTEFTDAEIQEWYKGFLKDCPSGHLSVEEFKKIYGNFFPYGDASKFA 65
            ||...|.|...:.||:           ..||..|:::.|||.:::.|.|.:........:||.:.
Zfish     1 MGAHASNLDEVLAEDM-----------HYWYNKFMRESPSGLITLFELKNMLEMQGMTEEASSYV 54

  Fly    66 EHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAIYK 130
            :.||.|||.:|||.|||.|::.|:|:..:|::.|||||.|.::|.||||.|.|.||..|..||..
Zfish    55 DQVFFTFDMDGDGYIDFVEYIAAVSLLLKGEINQKLKWYFKLFDQDGNGKIDRDEMETIFKAIQD 119

  Fly   131 MVGSVMKMPEDESTPEKRTDKIFRQMDRNKDGKLSLEEFIEGAKSDPSIVRLL 183
            :..|.      |..|:.....|:.::|.|.:|:|:|||||.|||..|.|:.:|
Zfish   120 ITRSY------EIPPDDIVSLIYERIDVNNEGELTLEEFITGAKEHPDIMEML 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NcaNP_788543.1 FRQ1 13..179 CDD:227455 62/165 (38%)
guca1cNP_919374.1 FRQ1 6..162 CDD:227455 64/172 (37%)
EFh 53..110 CDD:238008 28/56 (50%)
EFh 89..157 CDD:238008 31/73 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0044
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23055
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

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