DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nca and CG2256

DIOPT Version :9

Sequence 1:NP_788543.1 Gene:Nca / 40186 FlyBaseID:FBgn0013303 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_572437.2 Gene:CG2256 / 31727 FlyBaseID:FBgn0029995 Length:324 Species:Drosophila melanogaster


Alignment Length:216 Identity:52/216 - (24%)
Similarity:100/216 - (46%) Gaps:35/216 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKQNSKLKPEVLEDLKQNTEFTDAEIQ---EWYKGFLKDC----------------PSGHLSVE 46
            |.:.:.|:.|::|:.|::.|.||..|:.   ..|:..:.:|                ...|.:||
  Fly   101 MDELSGKVNPKLLDSLRKKTRFTKDELDALCRIYRKLVSNCQYAAKTLASSSSSAAIAKPHAAVE 165

  Fly    47 -----EFKKIYGNFFPYGDASKFAEHVFRTFDANGDG-TIDFREFLCALSVTSRGKLEQKLKWAF 105
                 .|:::..:.|.........|.:|.::|...:| .:....:|..||...||...::..:.|
  Fly   166 GIDRIVFRELLHSTFDIVTEEILMERIFCSWDKAHEGLPLRLEGWLIGLSTFLRGTPAERAAFCF 230

  Fly   106 SMYDLDGNGYISRQEMLEIVTAIYKMVGSVMKMPEDESTPEKRTDK---IFRQMDRNKDGKLSLE 167
            .:|||:.:|:|::.||..::.      ..::|.|:||...|...|.   :.::.|.:||||:|||
  Fly   231 RVYDLNTDGFITKDEMFTLLR------NCLIKQPQDEDPDEGVKDLVEIVLKKFDLDKDGKVSLE 289

  Fly   168 EFIEGAKSDPSIVRLL-QCDP 187
            :|:....::|.::... ||.|
  Fly   290 DFMGTVTAEPLLIEAFGQCLP 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NcaNP_788543.1 FRQ1 13..179 CDD:227455 46/193 (24%)
CG2256NP_572437.2 EFh 228..292 CDD:238008 22/69 (32%)
EF-hand_7 229..292 CDD:290234 22/68 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442308
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0044
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23055
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
54.840

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