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Protein Alignment Nca and Clxn
DIOPT Version :10
| Sequence 1: | NP_788543.1 |
Gene: | Nca / 40186 |
FlyBaseID: | FBgn0013303 |
Length: | 190 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001100400.1 |
Gene: | Clxn / 301957 |
RGDID: | 1594548 |
Length: | 212 |
Species: | Rattus norvegicus |
| Alignment Length: | 129 |
Identity: | 41/129 - (31%) |
| Similarity: | 73/129 - (56%) |
Gaps: | 12/129 - (9%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 66 EHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAIYK 130
:.|||.||.:.||.|...|::..||:..||.|::|:|:.|.::||:|:|:||::|| .:.
Rat 71 DRVFRGFDRDNDGCISVSEWVHGLSLFLRGTLDEKMKYCFEVFDLNGDGFISKEEM------FHM 129
Fly 131 MVGSVMKMPEDESTPEKRTDKI---FRQMDRNKDGKLSLEEFIEGAKSDPSIVRLL-QC--DPQ 188
:..|::|.|.:|...|...|.: .::||.:.|||||..::....:.:..::... .| ||:
Rat 130 LKNSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFVDYETAVREETLLLEAFGPCLPDPK 193
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| Nca | NP_788543.1 |
FRQ1 |
21..175 |
CDD:444056 |
38/111 (34%) |
| Clxn | NP_001100400.1 |
FRQ1 |
<67..177 |
CDD:444056 |
38/111 (34%) |
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