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Protein Alignment Nca and Guca1a
DIOPT Version :9
Sequence 1: | NP_788543.1 |
Gene: | Nca / 40186 |
FlyBaseID: | FBgn0013303 |
Length: | 190 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001100357.1 |
Gene: | Guca1a / 301233 |
RGDID: | 1308712 |
Length: | 202 |
Species: | Rattus norvegicus |
Alignment Length: | 169 |
Identity: | 73/169 - (43%) |
Similarity: | 108/169 - (63%) |
Gaps: | 8/169 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 KQNTEFTDAEIQEWYKGFLKDCPSGHLSVEEFKKIYG--NFFPYGDASKFAEHVFRTFDANGDGT 79
|...|.:..|..:|||.|:.:||||.|::.||::.:| |..| .||::.|.:|.|||.|.||.
Rat 8 KSVEELSSTECHQWYKKFMTECPSGQLTLYEFRQFFGLKNLSP--SASQYVEQMFETFDFNKDGY 70
Fly 80 IDFREFLCALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAIYKMVGSVMKMPEDEST 144
|||.|::.|||:..:||:||||:|.|.:||:||||.|.|.|:|.|:.|| .::....:...:
Rat 71 IDFMEYVAALSLVLKGKVEQKLRWYFKLYDVDGNGCIDRDELLTIIRAI----RTINPWSDSSMS 131
Fly 145 PEKRTDKIFRQMDRNKDGKLSLEEFIEGAKSDPSIVRLL 183
.|:.||.:|.::|.|.||:||||||:||.:.|..::..|
Rat 132 AEEFTDTVFAKIDINGDGELSLEEFMEGVQKDQMLLDTL 170
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Nca | NP_788543.1 |
FRQ1 |
13..179 |
CDD:227455 |
72/163 (44%) |
Guca1a | NP_001100357.1 |
FRQ1 |
12..163 |
CDD:227455 |
70/156 (45%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000038 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR23055 |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
1 |
1.000 |
- |
- |
|
X31 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 4.010 |
|
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