DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nca and ncs1

DIOPT Version :9

Sequence 1:NP_788543.1 Gene:Nca / 40186 FlyBaseID:FBgn0013303 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_592879.1 Gene:ncs1 / 2542523 PomBaseID:SPAC18B11.04 Length:190 Species:Schizosaccharomyces pombe


Alignment Length:183 Identity:119/183 - (65%)
Similarity:144/183 - (78%) Gaps:0/183 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKQNSKLKPEVLEDLKQNTEFTDAEIQEWYKGFLKDCPSGHLSVEEFKKIYGNFFPYGDASKFA 65
            |||..|||..:.|:||.::|.|...|:|:|||||.||||||||:..||:|||..|||:||.|.||
pombe     1 MGKSQSKLSQDQLQDLVRSTRFDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFA 65

  Fly    66 EHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAIYK 130
            |:||..|||:.:|.|||:||:|||||||||:|..||.|||.:||||.||.||..|||.||.||||
pombe    66 EYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYK 130

  Fly   131 MVGSVMKMPEDESTPEKRTDKIFRQMDRNKDGKLSLEEFIEGAKSDPSIVRLL 183
            ||||::|:||||.|||||.:|||..||:||||:|:||||.||:|.||:||..|
pombe   131 MVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDPTIVSAL 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NcaNP_788543.1 FRQ1 13..179 CDD:227455 110/165 (67%)
ncs1NP_592879.1 FRQ1 9..179 CDD:227455 110/169 (65%)
EFh <36..86 CDD:298682 32/49 (65%)
EFh 65..125 CDD:238008 39/59 (66%)
EFh 100..172 CDD:238008 50/71 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 109 1.000 Domainoid score I1627
eggNOG 1 0.900 - - E2759_KOG0044
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 253 1.000 Inparanoid score I772
OMA 1 1.010 - - QHG53747
OrthoFinder 1 1.000 - - FOG0000038
OrthoInspector 1 1.000 - - oto101547
orthoMCL 1 0.900 - - OOG6_100764
Panther 1 1.100 - - O PTHR23055
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
TreeFam 00.000 Not matched by this tool.
1110.870

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