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Protein Alignment Nca and Usp32
DIOPT Version :9
Sequence 1: | NP_788543.1 |
Gene: | Nca / 40186 |
FlyBaseID: | FBgn0013303 |
Length: | 190 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_011247292.1 |
Gene: | Usp32 / 237898 |
MGIID: | 2144475 |
Length: | 1618 |
Species: | Mus musculus |
Alignment Length: | 159 |
Identity: | 47/159 - (29%) |
Similarity: | 74/159 - (46%) |
Gaps: | 18/159 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 18 QNTEFTDAEIQEWYKGFLK-DCPSGHLSVEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTID 81
:.::..|.|.:.| .|| ...:|...:|.| |...........:|.:|..||.|.|..||
Mouse 192 EESDIIDLEKRYW---LLKAQSRTGRFDLETF----GPLVSPPIRPSLSEGLFNAFDENRDNHID 249
Fly 82 FREFLCALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAIYKMVGSVMKMPEDESTPE 146
|:|..|.||...||.|.::.|:.|.::|:|.:|.:||.|:.::|.|:.: |.|....:..||
Mouse 250 FKEISCGLSACCRGPLAERQKFCFKVFDVDRDGVLSRVELKDMVVALLE----VWKDNRTDDIPE 310
Fly 147 KRTD------KIFRQMDRNKDGKLSLEEF 169
...| :|....|..|.|.|:||::
Mouse 311 LHMDLSDIVERILNAHDTTKVGHLTLEDY 339
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Nca | NP_788543.1 |
FRQ1 |
13..179 |
CDD:227455 |
47/159 (30%) |
Usp32 | XP_011247292.1 |
FRQ1 |
189..339 |
CDD:227455 |
47/157 (30%) |
UBP12 |
518..1330 |
CDD:227847 |
|
UCH |
<1248..1578 |
CDD:366104 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG0044 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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