DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nca and ncs-2

DIOPT Version :9

Sequence 1:NP_788543.1 Gene:Nca / 40186 FlyBaseID:FBgn0013303 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_001366858.1 Gene:ncs-2 / 172866 WormBaseID:WBGene00003564 Length:190 Species:Caenorhabditis elegans


Alignment Length:185 Identity:98/185 - (52%)
Similarity:133/185 - (71%) Gaps:3/185 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKQNS--KLKPEVLEDLKQNTEFTDAEIQEWYKGFLKDCPSGHLSVEEFKKIYGNFFPYGDASK 63
            ||.:.|  ||..|.||.||:||.||:.:|:||||||::|||.|||:.|:|.|:|.:|||.|.|..
 Worm     1 MGIKGSKPKLSKEDLEFLKKNTNFTEEQIKEWYKGFVQDCPKGHLTKEQFIKVYKDFFPSGSAEG 65

  Fly    64 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAI 128
            |.||||||||.:..|.|||:|||.|::|||.|..||||:|||.|||:||||.|..:||::|:.||
 Worm    66 FCEHVFRTFDTDNSGFIDFKEFLLAINVTSSGTPEQKLEWAFRMYDIDGNGTIDEKEMIKIIEAI 130

  Fly   129 YKMVGSVMKMPEDESTPEKRTDKIFRQMDRNKDGKLSLEEFIEGAKSDPSIVRLL 183
            |:|:|..:....|:| |.||...||.:||.|.|.:|:|:||::|..:|..:.::|
 Worm   131 YEMLGPEVTKSADDS-PRKRAKMIFEKMDVNNDKELTLKEFVDGCLADKELFQIL 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NcaNP_788543.1 FRQ1 13..179 CDD:227455 91/165 (55%)
ncs-2NP_001366858.1 FRQ1 18..178 CDD:227455 88/160 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0044
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1369072at2759
OrthoFinder 1 1.000 - - FOG0000038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

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