DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nca and LOC1274448

DIOPT Version :10

Sequence 1:NP_788543.1 Gene:Nca / 40186 FlyBaseID:FBgn0013303 Length:190 Species:Drosophila melanogaster
Sequence 2:XP_003436778.1 Gene:LOC1274448 / 1274448 VectorBaseID:AGAMI1_004423 Length:170 Species:Anopheles gambiae


Alignment Length:172 Identity:58/172 - (33%)
Similarity:93/172 - (54%) Gaps:22/172 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKQNSKLKPEVLEDLKQNTEFTDAEIQEWYKGFLK-DCP-SGHLSVEEFKKIYGNFFPYGDASK 63
            ||.:.| |..|:.      :.|...||:...|.|.| |.. ||.||::||..:     |....:.
Mosquito     1 MGNETS-LPMELC------SNFDADEIRRLGKRFKKLDLDNSGALSIDEFMSL-----PELQQNP 53

  Fly    64 FAEHVFRTFDANGDGTIDFREFLCALSVTS-RGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTA 127
            ..:.|...|||:|:|.:||:||:..:|..| :|....|||:||.:||:|.:||||..|:.::   
Mosquito    54 LVQRVIDIFDADGNGEVDFKEFIQGVSQFSVKGDKLSKLKFAFRIYDMDNDGYISNGELFQV--- 115

  Fly   128 IYKMVGSVMKMPEDESTPEKRTDKIFRQMDRNKDGKLSLEEF 169
            :..|||:.:|    ::..::..||.....|:::|||:|.:||
Mosquito   116 LKMMVGNNLK----DTQLQQIVDKTIVFADKDEDGKISFDEF 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NcaNP_788543.1 FRQ1 21..175 CDD:444056 53/152 (35%)
LOC1274448XP_003436778.1 FRQ1 20..157 CDD:444056 51/146 (35%)

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