DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nca and LOC1269900

DIOPT Version :10

Sequence 1:NP_788543.1 Gene:Nca / 40186 FlyBaseID:FBgn0013303 Length:190 Species:Drosophila melanogaster
Sequence 2:XP_061519680.1 Gene:LOC1269900 / 1269900 VectorBaseID:AGAMI1_011752 Length:243 Species:Anopheles gambiae


Alignment Length:186 Identity:90/186 - (48%)
Similarity:125/186 - (67%) Gaps:5/186 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKQNSK--LKPEVLEDLKQNTEFTDAEIQEWYKGFLKDCPSGHLSVEEFKKIYGNFFPYGDASK 63
            ||...||  |..|.::.||.:|.:.::.|:||||||.:|||:|.|:..:|..:|..|||.|:|.:
Mosquito    58 MGCLGSKDRLSKEDMDFLKSHTRYDESTIKEWYKGFKQDCPNGKLTPAKFVDMYKMFFPSGNAEE 122

  Fly    64 FAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAI 128
            |.:|||||||.:.:|.|||:|||.|:.|||.|..|:||||||.|||:||||.|..|||.:||.||
Mosquito   123 FCDHVFRTFDMDKNGYIDFKEFLLAIDVTSSGTPEEKLKWAFRMYDVDGNGVIDIQEMTKIVQAI 187

  Fly   129 YKMVGSV-MKMPEDESTPEKRTDKIFRQMDRNKDGKLSLEEFIEGAKSDPSIVRLL 183
            |.|:|:. ...|.|.:  |:|...||.:||.|.||:|:.:||::|...|..:.::|
Mosquito   188 YDMLGACSSNKPADSA--EERAKNIFAKMDENNDGQLTQDEFLKGCLQDEELSKML 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NcaNP_788543.1 FRQ1 21..175 CDD:444056 79/154 (51%)
LOC1269900XP_061519680.1 None

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