DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nca and guca1c

DIOPT Version :10

Sequence 1:NP_788543.1 Gene:Nca / 40186 FlyBaseID:FBgn0013303 Length:190 Species:Drosophila melanogaster
Sequence 2:XP_002940159.1 Gene:guca1c / 100497028 XenbaseID:XB-GENE-6039675 Length:188 Species:Xenopus tropicalis


Alignment Length:162 Identity:71/162 - (43%)
Similarity:107/162 - (66%) Gaps:14/162 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 EIQEWYKGFLKDCPSGHLSVEEFKKIYG----NFFPYGDASKFAEHVFRTFDANGDGTIDFREFL 86
            |:.:||..|:|:||||.||:.|||::.|    ||    :|:::.:.||.|||.|.||.|||.||:
 Frog    15 ELHKWYGKFMKECPSGQLSLHEFKELLGLQGMNF----EANRYIDQVFSTFDMNKDGFIDFLEFI 75

  Fly    87 CALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAIYKMVGSVMKMPEDESTPEKRTDK 151
            .|:::..|||::|||||.|.:||.||||.|.|:|:|.|:||:..:.|      ....:||:.|..
 Frog    76 AAINLVLRGKIDQKLKWYFKLYDADGNGSIDRKELLSILTAVRAING------HRGMSPEEFTSM 134

  Fly   152 IFRQMDRNKDGKLSLEEFIEGAKSDPSIVRLL 183
            :|.::|.|.||:|:|||||.|.:.|..::.::
 Frog   135 VFEKIDVNGDGELTLEEFINGIEKDEQLLEII 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NcaNP_788543.1 FRQ1 21..175 CDD:444056 70/152 (46%)
guca1cXP_002940159.1 FRQ1 29..158 CDD:444056 63/138 (46%)

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