DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nca and kcnip1

DIOPT Version :9

Sequence 1:NP_788543.1 Gene:Nca / 40186 FlyBaseID:FBgn0013303 Length:190 Species:Drosophila melanogaster
Sequence 2:XP_002937770.1 Gene:kcnip1 / 100497014 XenbaseID:XB-GENE-973728 Length:230 Species:Xenopus tropicalis


Alignment Length:176 Identity:77/176 - (43%)
Similarity:119/176 - (67%) Gaps:0/176 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KPEVLEDLKQNTEFTDAEIQEWYKGFLKDCPSGHLSVEEFKKIYGNFFPYGDASKFAEHVFRTFD 73
            :||.||.|:..|.|...|:|..|:||..:||||.::.:.||.||..|||:||||.:|.::|..||
 Frog    49 RPEGLEQLEAQTNFNKRELQVLYRGFKNECPSGVVNEDTFKLIYSQFFPHGDASMYAHYLFNAFD 113

  Fly    74 ANGDGTIDFREFLCALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAIYKMVGSVMKM 138
            |...|::.|.:|:.||||..||.:.:||:|.|::||::.:|.|:::||::||.|||.|:|.....
 Frog   114 AAQSGSVKFEDFVAALSVLLRGSIHEKLRWTFNLYDINKDGNINKEEMMDIVKAIYDMMGKYTYP 178

  Fly   139 PEDESTPEKRTDKIFRQMDRNKDGKLSLEEFIEGAKSDPSIVRLLQ 184
            ...|..|::..:..|::||:||||.::|:||||..:.|.:|:|.||
 Frog   179 VLKEDAPKQHVEVFFQKMDKNKDGVVTLDEFIESCQEDDNIMRSLQ 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NcaNP_788543.1 FRQ1 13..179 CDD:227455 71/165 (43%)
kcnip1XP_002937770.1 FRQ1 53..219 CDD:227455 71/165 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000038
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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