DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nca and klhl17

DIOPT Version :10

Sequence 1:NP_788543.1 Gene:Nca / 40186 FlyBaseID:FBgn0013303 Length:190 Species:Drosophila melanogaster
Sequence 2:XP_004916201.1 Gene:klhl17 / 100491332 XenbaseID:XB-GENE-977875 Length:627 Species:Xenopus tropicalis


Alignment Length:20 Identity:6/20 - (30%)
Similarity:13/20 - (65%) Gaps:0/20 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 LEQKLKWAFSMYDLDGNGYI 116
            |||.:::|::...:.|.|.:
 Frog   128 LEQLVQYAYTAEIVVGEGNV 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NcaNP_788543.1 FRQ1 21..175 CDD:444056 6/20 (30%)
klhl17XP_004916201.1 BTB_POZ_KLHL17_actinfilin 38..176 CDD:349555 6/20 (30%)
PHA03098 77..543 CDD:222983 6/20 (30%)
KELCH repeat 321..360 CDD:276965
KELCH repeat 364..407 CDD:276965
KELCH repeat 411..454 CDD:276965
KELCH repeat 458..502 CDD:276965
KELCH repeat 505..549 CDD:276965
KELCH repeat 552..597 CDD:276965
Kelch 564..608 CDD:128874
Blue background indicates that the domain is not in the aligned region.

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