DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nca and kcnip4

DIOPT Version :9

Sequence 1:NP_788543.1 Gene:Nca / 40186 FlyBaseID:FBgn0013303 Length:190 Species:Drosophila melanogaster
Sequence 2:XP_002936758.1 Gene:kcnip4 / 100491280 XenbaseID:XB-GENE-5753458 Length:233 Species:Xenopus tropicalis


Alignment Length:176 Identity:75/176 - (42%)
Similarity:117/176 - (66%) Gaps:0/176 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KPEVLEDLKQNTEFTDAEIQEWYKGFLKDCPSGHLSVEEFKKIYGNFFPYGDASKFAEHVFRTFD 73
            :||.||.|:..|:||..|:|..|:||..:||||.::.|.||.||..|||.||||.:|..:|..||
 Frog    52 RPEALELLEAQTKFTKKELQILYRGFKNECPSGIVNEETFKDIYAQFFPQGDASTYAHFLFNAFD 116

  Fly    74 ANGDGTIDFREFLCALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAIYKMVGSVMKM 138
            .:.:|::.|.:|:..||...||.:::||.|||::||::.:|||:::||.:|:.:||.|:|.....
 Frog   117 TDHNGSVSFEDFVIGLSTLLRGTIQEKLNWAFNLYDINKDGYITKEEMFDIMKSIYDMMGKCTYP 181

  Fly   139 PEDESTPEKRTDKIFRQMDRNKDGKLSLEEFIEGAKSDPSIVRLLQ 184
            ...|.||.:..:..|::||.||||.:::|||||..:.|.:|:..:|
 Frog   182 LVREETPRQHVENFFQKMDINKDGVVTIEEFIESCQKDENIMCSMQ 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NcaNP_788543.1 FRQ1 13..179 CDD:227455 71/165 (43%)
kcnip4XP_002936758.1 FRQ1 63..222 CDD:227455 68/158 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000038
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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