DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nca and guca1bl

DIOPT Version :9

Sequence 1:NP_788543.1 Gene:Nca / 40186 FlyBaseID:FBgn0013303 Length:190 Species:Drosophila melanogaster
Sequence 2:XP_004913416.1 Gene:guca1bl / 100379842 XenbaseID:XB-GENE-5838913 Length:233 Species:Xenopus tropicalis


Alignment Length:187 Identity:77/187 - (41%)
Similarity:123/187 - (65%) Gaps:12/187 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKQNSKLKPEVLEDLKQNTEFTDAEIQEWYKGFLKDCPSGHLSVEEFKKIYGNFFPYGDASKFA 65
            ||:..:..|.|:  |:        |::|:.||.|:.:||||.|.:.|||:.:| .....:.|:|.
 Frog    41 MGQTQAAYKDEI--DV--------ADLQDMYKKFVTECPSGALFLHEFKQFFG-VSANNEVSQFM 94

  Fly    66 EHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAIYK 130
            |.:|::||.|.|.||||.|::.||::|.|||||.||:|:|.:||.||||.:.::|:.||:.:||.
 Frog    95 ESLFKSFDRNRDNTIDFLEYVAALNLTLRGKLEHKLRWSFKIYDKDGNGCVDKRELKEIIQSIYS 159

  Fly   131 MVGSVMKMPEDE-STPEKRTDKIFRQMDRNKDGKLSLEEFIEGAKSDPSIVRLLQCD 186
            :.....:..|.: .:||:..::||:.:|.|.||:|||:||:||||.|..::::||.|
 Frog   160 IKRGWRRDQEAQLMSPEEICERIFQIVDENGDGQLSLQEFVEGAKKDTWVLKMLQLD 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NcaNP_788543.1 FRQ1 13..179 CDD:227455 70/166 (42%)
guca1blXP_004913416.1 FRQ1 56..207 CDD:227455 67/151 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D495747at33208
OrthoFinder 1 1.000 - - FOG0000038
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23055
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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