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Protein Alignment Nca and rcvrn.1
DIOPT Version :9
Sequence 1: | NP_788543.1 |
Gene: | Nca / 40186 |
FlyBaseID: | FBgn0013303 |
Length: | 190 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_002937040.1 |
Gene: | rcvrn.1 / 100302393 |
XenbaseID: | XB-GENE-973335 |
Length: | 202 |
Species: | Xenopus tropicalis |
Alignment Length: | 191 |
Identity: | 94/191 - (49%) |
Similarity: | 141/191 - (73%) |
Gaps: | 3/191 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MG-KQNSKLKPEVLEDLKQNTEFTDAEIQEWYKGFLKDCPSGHLSVEEFKKIYGNFFPYGDASKF 64
|| .::|.|..|:||:|:.||:|:..|:..||:.|||:||:|.:|.::|:.||..|||..|...:
Frog 1 MGNSKSSALSKEILEELQLNTKFSQEELCTWYQSFLKECPTGRISKQQFEGIYSKFFPDADPKAY 65
Fly 65 AEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAIY 129
|.||||:||:|.|||:||:|::.||.:||.||..|||:||||:||:||||.|::.|:|||:|||:
Frog 66 ARHVFRSFDSNNDGTLDFKEYMIALHMTSSGKANQKLEWAFSLYDVDGNGTINKSEVLEIITAIF 130
Fly 130 KMVGS--VMKMPEDESTPEKRTDKIFRQMDRNKDGKLSLEEFIEGAKSDPSIVRLLQCDPQ 188
||:.: ...:||||:|||:||:||:....:..:.||:..|||:|..::..|:||:|.:||
Frog 131 KMINTEDQKHLPEDENTPERRTNKIWDFFGKKDNDKLTEGEFIQGIMNNKEILRLIQFEPQ 191
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Nca | NP_788543.1 |
FRQ1 |
13..179 |
CDD:227455 |
83/167 (50%) |
rcvrn.1 | XP_002937040.1 |
FRQ1 |
14..182 |
CDD:227455 |
83/167 (50%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
1 |
1.010 |
- |
- |
|
QHG53747 |
OrthoDB |
1 |
1.010 |
- |
- |
|
D495747at33208 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000038 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR23055 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X31 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
6 | 6.030 |
|
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