DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nca and XB5856770

DIOPT Version :10

Sequence 1:NP_788543.1 Gene:Nca / 40186 FlyBaseID:FBgn0013303 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_001096526.1 Gene:XB5856770 / 100125166 XenbaseID:XB-GENE-5856771 Length:211 Species:Xenopus tropicalis


Alignment Length:173 Identity:67/173 - (38%)
Similarity:115/173 - (66%) Gaps:8/173 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 EIQEWYKGFLKDCPSGHLSVEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFLCALS 90
            |:.|||:.|:::||||.:::.||:|.:.:.....::|::||.:||..|.||||.:||||::.|:|
 Frog    17 ELHEWYRKFVQECPSGLITLHEFRKYFCDCTVGTESSEYAEKIFRNLDKNGDGIVDFREYVTAIS 81

  Fly    91 VTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAIYKMVGSVMKMPEDESTPEKRTDKIFRQ 155
            :.::|..|:||:|:|.:||.|.:|.|:|.|||:|:.|:|||..:......:..|.|:.|::||.:
 Frog    82 MLAQGSPEEKLRWSFELYDKDRDGTITRCEMLDIMKAVYKMSLATSLAQSNPPTAEECTNRIFIR 146

  Fly   156 MDRNKDGKLSLEEFIEGAKSDPSIVRLLQCD--------PQSH 190
            :|::.:..:||:|||:|:..|..|..:|:||        |..|
 Frog   147 LDKDHNALISLQEFIDGSLDDDWIRDMLECDLRTLHVQRPHKH 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NcaNP_788543.1 FRQ1 21..175 CDD:444056 60/148 (41%)
XB5856770NP_001096526.1 FRQ1 31..163 CDD:444056 52/131 (40%)
EFh 55..117 CDD:238008 31/61 (51%)

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