DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nca and XB5856770

DIOPT Version :9

Sequence 1:NP_788543.1 Gene:Nca / 40186 FlyBaseID:FBgn0013303 Length:190 Species:Drosophila melanogaster
Sequence 2:NP_001096526.1 Gene:XB5856770 / 100125166 XenbaseID:XB-GENE-5856771 Length:211 Species:Xenopus tropicalis


Alignment Length:173 Identity:67/173 - (38%)
Similarity:115/173 - (66%) Gaps:8/173 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 EIQEWYKGFLKDCPSGHLSVEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFLCALS 90
            |:.|||:.|:::||||.:::.||:|.:.:.....::|::||.:||..|.||||.:||||::.|:|
 Frog    17 ELHEWYRKFVQECPSGLITLHEFRKYFCDCTVGTESSEYAEKIFRNLDKNGDGIVDFREYVTAIS 81

  Fly    91 VTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAIYKMVGSVMKMPEDESTPEKRTDKIFRQ 155
            :.::|..|:||:|:|.:||.|.:|.|:|.|||:|:.|:|||..:......:..|.|:.|::||.:
 Frog    82 MLAQGSPEEKLRWSFELYDKDRDGTITRCEMLDIMKAVYKMSLATSLAQSNPPTAEECTNRIFIR 146

  Fly   156 MDRNKDGKLSLEEFIEGAKSDPSIVRLLQCD--------PQSH 190
            :|::.:..:||:|||:|:..|..|..:|:||        |..|
 Frog   147 LDKDHNALISLQEFIDGSLDDDWIRDMLECDLRTLHVQRPHKH 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NcaNP_788543.1 FRQ1 13..179 CDD:227455 61/152 (40%)
XB5856770NP_001096526.1 FRQ1 17..167 CDD:227455 60/149 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D495747at33208
OrthoFinder 1 1.000 - - FOG0000038
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23055
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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